Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001301A_C01 KMC001301A_c01
(583 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM66124.1| unknown [Arabidopsis thaliana] 155 3e-37
ref|NP_565273.1| expressed protein; protein id: At2g01670.1, sup... 155 3e-37
ref|NP_172939.1| hypothetical protein; protein id: At1g14860.1 [... 154 6e-37
pir||B96762 unknown protein [imported] - Arabidopsis thaliana gi... 124 9e-28
ref|NP_177495.2| unknown protein; protein id: At1g73540.1, suppo... 124 9e-28
>gb|AAM66124.1| unknown [Arabidopsis thaliana]
Length = 177
Score = 155 bits (393), Expect = 3e-37
Identities = 69/106 (65%), Positives = 87/106 (81%)
Frame = -1
Query: 553 QGGWEIDESVEEAAIRESLEEAGVIGTVEGELGQWNFISKRYGIYYEGHMFPLFVKEQLD 374
+GGWE+DESVEEAA RE LEEAGV+G VE +LG+W+F+SK G YYEG MFP+ V EQL+
Sbjct: 59 KGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQLE 118
Query: 373 QWPEKNLRRRVWMTVAQAREACQHWWMKEALDILVQRLVSSQQQKK 236
WPE+++R+R+WM V +AREAC+ WWMKEALD+LV+RL S Q K
Sbjct: 119 LWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVERLSSPMNQPK 164
>ref|NP_565273.1| expressed protein; protein id: At2g01670.1, supported by cDNA:
8247., supported by cDNA: gi_13272382, supported by
cDNA: gi_15293192, supported by cDNA: gi_15724325
[Arabidopsis thaliana] gi|25367543|pir||F84427
hypothetical protein At2g01670 [imported] - Arabidopsis
thaliana gi|4220481|gb|AAD12704.1| expressed protein
[Arabidopsis thaliana]
gi|13272383|gb|AAK17130.1|AF325062_1 unknown protein
[Arabidopsis thaliana]
gi|13430438|gb|AAK25841.1|AF360131_1 unknown protein
[Arabidopsis thaliana] gi|15293193|gb|AAK93707.1|
unknown protein [Arabidopsis thaliana]
gi|15724326|gb|AAL06556.1|AF412103_1 At2g01670/T8O11.16
[Arabidopsis thaliana]
Length = 182
Score = 155 bits (393), Expect = 3e-37
Identities = 69/106 (65%), Positives = 87/106 (81%)
Frame = -1
Query: 553 QGGWEIDESVEEAAIRESLEEAGVIGTVEGELGQWNFISKRYGIYYEGHMFPLFVKEQLD 374
+GGWE+DESVEEAA RE LEEAGV+G VE +LG+W+F+SK G YYEG MFP+ V EQL+
Sbjct: 64 KGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQLE 123
Query: 373 QWPEKNLRRRVWMTVAQAREACQHWWMKEALDILVQRLVSSQQQKK 236
WPE+++R+R+WM V +AREAC+ WWMKEALD+LV+RL S Q K
Sbjct: 124 LWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVERLSSPMNQPK 169
>ref|NP_172939.1| hypothetical protein; protein id: At1g14860.1 [Arabidopsis
thaliana] gi|25367541|pir||D86282 protein F10B6.26
[imported] - Arabidopsis thaliana
gi|8778216|gb|AAF79225.1|AC006917_10 F10B6.26
[Arabidopsis thaliana] gi|26449995|dbj|BAC42118.1|
unknown protein [Arabidopsis thaliana]
gi|28973055|gb|AAO63852.1| unknown protein [Arabidopsis
thaliana]
Length = 176
Score = 154 bits (390), Expect = 6e-37
Identities = 67/98 (68%), Positives = 86/98 (87%)
Frame = -1
Query: 553 QGGWEIDESVEEAAIRESLEEAGVIGTVEGELGQWNFISKRYGIYYEGHMFPLFVKEQLD 374
+GGWE+DESVEEAA RESLEEAGV+G VE +LG+W+F+SK G +YEG MFP+ VKE+L+
Sbjct: 59 KGGWELDESVEEAASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELE 118
Query: 373 QWPEKNLRRRVWMTVAQAREACQHWWMKEALDILVQRL 260
WPE++LR+R+WM V +AR+AC+ WWMKEALD+LVQRL
Sbjct: 119 LWPEQHLRQRIWMKVDEARDACRDWWMKEALDVLVQRL 156
>pir||B96762 unknown protein [imported] - Arabidopsis thaliana
gi|11120797|gb|AAG30977.1|AC012396_13 unknown protein
[Arabidopsis thaliana]
Length = 177
Score = 124 bits (311), Expect = 9e-28
Identities = 52/102 (50%), Positives = 77/102 (74%)
Frame = -1
Query: 553 QGGWEIDESVEEAAIRESLEEAGVIGTVEGELGQWNFISKRYGIYYEGHMFPLFVKEQLD 374
+GGWEIDES+EEAA+RE++EEAGV G +E LG+W + SKR+ + ++GHMFPL V +Q +
Sbjct: 76 KGGWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPLLVSQQFE 135
Query: 373 QWPEKNLRRRVWMTVAQAREACQHWWMKEALDILVQRLVSSQ 248
WPE R+R W+++++A E CQ+ WM+EAL+ + R +Q
Sbjct: 136 IWPESEFRQRKWVSLSEAIELCQNSWMREALEAFINRKCQTQ 177
>ref|NP_177495.2| unknown protein; protein id: At1g73540.1, supported by cDNA:
gi_18252868 [Arabidopsis thaliana]
gi|18252869|gb|AAL62361.1| unknown protein [Arabidopsis
thaliana] gi|25083529|gb|AAN72091.1| unknown protein
[Arabidopsis thaliana]
Length = 198
Score = 124 bits (311), Expect = 9e-28
Identities = 52/102 (50%), Positives = 77/102 (74%)
Frame = -1
Query: 553 QGGWEIDESVEEAAIRESLEEAGVIGTVEGELGQWNFISKRYGIYYEGHMFPLFVKEQLD 374
+GGWEIDES+EEAA+RE++EEAGV G +E LG+W + SKR+ + ++GHMFPL V +Q +
Sbjct: 97 KGGWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPLLVSQQFE 156
Query: 373 QWPEKNLRRRVWMTVAQAREACQHWWMKEALDILVQRLVSSQ 248
WPE R+R W+++++A E CQ+ WM+EAL+ + R +Q
Sbjct: 157 IWPESEFRQRKWVSLSEAIELCQNSWMREALEAFINRKCQTQ 198
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,416,070
Number of Sequences: 1393205
Number of extensions: 8817145
Number of successful extensions: 24022
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 23342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23994
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
