Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001277A_C01 KMC001277A_c01
(502 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177038.1| ATPase, putative; protein id: At1g68710.1 [Arab... 120 7e-27
ref|NP_189189.1| ATPase II, putative; protein id: At3g25610.1 [A... 118 4e-26
ref|NP_172780.1| potential phospholipid-transporting ATPase 11; ... 111 4e-24
sp|Q9LK90|ALA8_ARATH Potential phospholipid-transporting ATPase ... 107 6e-23
ref|NP_189425.1| P-type ATPase, putative; protein id: At3g27870.... 107 6e-23
>ref|NP_177038.1| ATPase, putative; protein id: At1g68710.1 [Arabidopsis thaliana]
gi|12229673|sp|Q9SX33|ALA9_ARATH Potential
phospholipid-transporting ATPase 9 (Aminophospholipid
flippase 9) gi|25404765|pir||F96711 hypothetical protein
F24J5.6 [imported] - Arabidopsis thaliana
gi|5734708|gb|AAD49973.1|AC008075_6 Similar to
gb|AF067820 ATPase II from Homo sapiens and is a member
of PF|00122 E1-E2 ATPases family. [Arabidopsis thaliana]
Length = 1200
Score = 120 bits (302), Expect = 7e-27
Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
Frame = +2
Query: 227 MAGG----RRRKHHFSRIHAFSCGKASMKDEHSLIGGPGFSRKVYCNDPDRAYSSLQYYG 394
M GG RRR+ S+++ +C +A K +HS IGGPGFSR VYCN+PD + + Y
Sbjct: 1 MVGGGTKRRRRRLQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYS 60
Query: 395 DNYVSTTKYTLDTFLPKSLFEQFRRVANFYFLVCAI 502
DNYV TTKYTL TFLPKSLFEQFRRVANFYFLV +
Sbjct: 61 DNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVTGV 96
>ref|NP_189189.1| ATPase II, putative; protein id: At3g25610.1 [Arabidopsis thaliana]
gi|12229653|sp|Q9LI83|ALAA_ARATH Potential
phospholipid-transporting ATPase 10 (Aminophospholipid
flippase 10) gi|11994751|dbj|BAB03080.1| P-type
transporting ATPase [Arabidopsis thaliana]
Length = 1202
Score = 118 bits (295), Expect = 4e-26
Identities = 53/88 (60%), Positives = 69/88 (78%)
Frame = +2
Query: 239 RRRKHHFSRIHAFSCGKASMKDEHSLIGGPGFSRKVYCNDPDRAYSSLQYYGDNYVSTTK 418
RRR+ H S+I++++CGK+S +++HS IGGPGFSR VYCN+P + + Y NYV +TK
Sbjct: 7 RRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVRSTK 66
Query: 419 YTLDTFLPKSLFEQFRRVANFYFLVCAI 502
YT+ +F PKSLFEQFRRVANFYFLV I
Sbjct: 67 YTVASFFPKSLFEQFRRVANFYFLVTGI 94
>ref|NP_172780.1| potential phospholipid-transporting ATPase 11; protein id:
At1g13210.1, supported by cDNA: gi_20466791 [Arabidopsis
thaliana] gi|12229668|sp|Q9SAF5|ALAB_ARATH Potential
phospholipid-transporting ATPase 11 (Aminophospholipid
flippase 11) gi|25529123|pir||F86266 probable
phospholipid-translocating ATPase (EC 3.6.3.1) -
Arabidopsis thaliana
gi|4850404|gb|AAD31074.1|AC007357_23 Similar to
gb|AF038007 FIC1 gene from Homo sapiens and is a member
of the PF|00122 E1-E2 ATPase family. ESTs gb|T45045 and
gb|AA394473 come from this gene. [Arabidopsis thaliana]
gi|20466792|gb|AAM20713.1| puative calcium-transporting
ATPase [Arabidopsis thaliana]
Length = 1203
Score = 111 bits (278), Expect = 4e-24
Identities = 52/88 (59%), Positives = 67/88 (76%)
Frame = +2
Query: 239 RRRKHHFSRIHAFSCGKASMKDEHSLIGGPGFSRKVYCNDPDRAYSSLQYYGDNYVSTTK 418
RRR+ H S I+AF K++ +++HS IGGPGFSR VYCN+P+ + + Y NYV +TK
Sbjct: 5 RRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYVRSTK 64
Query: 419 YTLDTFLPKSLFEQFRRVANFYFLVCAI 502
YTL +F+PKSLFEQFRRVANFYFLV +
Sbjct: 65 YTLASFIPKSLFEQFRRVANFYFLVTGV 92
>sp|Q9LK90|ALA8_ARATH Potential phospholipid-transporting ATPase 8 (Aminophospholipid
flippase 8) gi|11994492|dbj|BAB02533.1| P-type
transporting ATPase-like protein [Arabidopsis thaliana]
Length = 1189
Score = 107 bits (268), Expect = 6e-23
Identities = 52/91 (57%), Positives = 64/91 (70%)
Frame = +2
Query: 227 MAGGRRRKHHFSRIHAFSCGKASMKDEHSLIGGPGFSRKVYCNDPDRAYSSLQYYGDNYV 406
MAG RR+ FS++++F C K +++HS IG G+SR V+CNDPD + Y NYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 407 STTKYTLDTFLPKSLFEQFRRVANFYFLVCA 499
STTKYT F+PKSLFEQFRRVAN YFLV A
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVA 91
>ref|NP_189425.1| P-type ATPase, putative; protein id: At3g27870.1 [Arabidopsis
thaliana]
Length = 1174
Score = 107 bits (268), Expect = 6e-23
Identities = 52/91 (57%), Positives = 64/91 (70%)
Frame = +2
Query: 227 MAGGRRRKHHFSRIHAFSCGKASMKDEHSLIGGPGFSRKVYCNDPDRAYSSLQYYGDNYV 406
MAG RR+ FS++++F C K +++HS IG G+SR V+CNDPD + Y NYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 407 STTKYTLDTFLPKSLFEQFRRVANFYFLVCA 499
STTKYT F+PKSLFEQFRRVAN YFLV A
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVA 91
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 420,752,213
Number of Sequences: 1393205
Number of extensions: 8651723
Number of successful extensions: 29796
Number of sequences better than 10.0: 169
Number of HSP's better than 10.0 without gapping: 26946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29478
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15072921604
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
