Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001274A_C01 KMC001274A_c01
(550 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H86246 hypothetical protein [imported] - Arabidopsis thalia... 109 2e-23
ref|NP_172597.1| serine/threonine kinase, putative; protein id: ... 107 7e-23
ref|NP_172600.1| receptor-like protein kinase, putative; protein... 100 2e-20
pir||D86247 hypothetical protein [imported] - Arabidopsis thalia... 100 2e-20
gb|AAF16650.1|AC011661_28 T23J18.2 [Arabidopsis thaliana] 96 4e-19
>pir||H86246 hypothetical protein [imported] - Arabidopsis thaliana
gi|5734728|gb|AAD49993.1|AC007259_6 Very similar to
receptor-like protein kinases [Arabidopsis thaliana]
Length = 820
Score = 109 bits (273), Expect = 2e-23
Identities = 53/113 (46%), Positives = 75/113 (65%), Gaps = 1/113 (0%)
Frame = -1
Query: 547 RNDDSLSLLGFAWKLWTEENIISLIDPEIWDPSVESSMLRCIHIGLLCVQEIPRERPAIS 368
R + + +LL + W +W E I SL+DPEI+D E + +CIHIGLLCVQE +RP++S
Sbjct: 708 RRNSNSTLLAYVWSIWNEGEINSLVDPEIFDLLFEKEIHKCIHIGLLCVQEAANDRPSVS 767
Query: 367 TVVLMLISEITQLPPPGQVAFVQKHNAKSSDSSQKSQC-SSNNNVTLSEVHGR 212
TV ML SEI +P P Q AF+ ++N ++SS+ S S NNVT+++V GR
Sbjct: 768 TVCSMLSSEIADIPEPKQPAFISRNNVPEAESSENSDLKDSINNVTITDVTGR 820
>ref|NP_172597.1| serine/threonine kinase, putative; protein id: At1g11300.1
[Arabidopsis thaliana]
Length = 1635
Score = 107 bits (268), Expect = 7e-23
Identities = 52/112 (46%), Positives = 74/112 (65%), Gaps = 1/112 (0%)
Frame = -1
Query: 547 RNDDSLSLLGFAWKLWTEENIISLIDPEIWDPSVESSMLRCIHIGLLCVQEIPRERPAIS 368
R + + +LL + W +W E I SL+DPEI+D E + +CIHIGLLCVQE +RP++S
Sbjct: 693 RRNSNSTLLAYVWSIWNEGEINSLVDPEIFDLLFEKEIHKCIHIGLLCVQEAANDRPSVS 752
Query: 367 TVVLMLISEITQLPPPGQVAFVQKHNAKSSDSSQKSQC-SSNNNVTLSEVHG 215
TV ML SEI +P P Q AF+ ++N ++SS+ S S NNVT+++V G
Sbjct: 753 TVCSMLSSEIADIPEPKQPAFISRNNVPEAESSENSDLKDSINNVTITDVTG 804
Score = 94.4 bits (233), Expect = 8e-19
Identities = 44/113 (38%), Positives = 71/113 (61%), Gaps = 1/113 (0%)
Frame = -1
Query: 547 RNDDSLSLLGFAWKLWTEENIISLIDPEIWDPSVESSMLRCIHIGLLCVQEIPRERPAIS 368
R + +LL W +W E I ++DPEI+D E + +C+HI LLCVQ+ +RP++S
Sbjct: 1523 RRNSHSTLLAHVWSIWNEGEINGMVDPEIFDQLFEKEIRKCVHIALLCVQDAANDRPSVS 1582
Query: 367 TVVLMLISEITQLPPPGQVAFVQKHNAKSSDSSQK-SQCSSNNNVTLSEVHGR 212
TV +ML SE+ +P P Q AF+ ++ ++ S+ + +S NNVT+++V GR
Sbjct: 1583 TVCMMLSSEVADIPEPKQPAFMPRNVGLEAEFSESIALKASINNVTITDVSGR 1635
>ref|NP_172600.1| receptor-like protein kinase, putative; protein id: At1g11330.1
[Arabidopsis thaliana]
Length = 840
Score = 100 bits (248), Expect = 2e-20
Identities = 49/113 (43%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = -1
Query: 547 RNDDSLSLLGFAWKLWTEENIISLIDPEIWDPSVESSMLRCIHIGLLCVQEIPRERPAIS 368
+ +++L+LL +AWKLW + SL DP ++D E + +C+HIGLLCVQE+ +RP +S
Sbjct: 728 KEENNLNLLAYAWKLWNDGEAASLADPAVFDKCFEKEIEKCVHIGLLCVQEVANDRPNVS 787
Query: 367 TVVLMLISEITQLPPPGQVAFVQKHNAKSSDSS-QKSQCSSNNNVTLSEVHGR 212
V+ ML +E L P Q AF+ + A ++SS Q SQ S N+V+L+ V GR
Sbjct: 788 NVIWMLTTENMSLADPKQPAFIVRRGASEAESSDQSSQKVSINDVSLTAVTGR 840
>pir||D86247 hypothetical protein [imported] - Arabidopsis thaliana
gi|5734724|gb|AAD49989.1|AC007259_2 Very similar to
receptor-like protein kinase [Arabidopsis thaliana]
Length = 797
Score = 100 bits (248), Expect = 2e-20
Identities = 49/113 (43%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = -1
Query: 547 RNDDSLSLLGFAWKLWTEENIISLIDPEIWDPSVESSMLRCIHIGLLCVQEIPRERPAIS 368
+ +++L+LL +AWKLW + SL DP ++D E + +C+HIGLLCVQE+ +RP +S
Sbjct: 685 KEENNLNLLAYAWKLWNDGEAASLADPAVFDKCFEKEIEKCVHIGLLCVQEVANDRPNVS 744
Query: 367 TVVLMLISEITQLPPPGQVAFVQKHNAKSSDSS-QKSQCSSNNNVTLSEVHGR 212
V+ ML +E L P Q AF+ + A ++SS Q SQ S N+V+L+ V GR
Sbjct: 745 NVIWMLTTENMSLADPKQPAFIVRRGASEAESSDQSSQKVSINDVSLTAVTGR 797
>gb|AAF16650.1|AC011661_28 T23J18.2 [Arabidopsis thaliana]
Length = 809
Score = 95.5 bits (236), Expect = 4e-19
Identities = 48/115 (41%), Positives = 74/115 (63%), Gaps = 2/115 (1%)
Frame = -1
Query: 550 FRND-DSLSLLGFAWKLWTEENIISLIDPEIWDPSVESSMLRCIHIGLLCVQEIPRERPA 374
F ND + +L +AWKLW I+L+DP I++ E+ + RC+H+GLLCVQ+ +RP+
Sbjct: 695 FYNDGQNPNLSAYAWKLWNTGEDIALVDPVIFEECFENEIRRCVHVGLLCVQDHANDRPS 754
Query: 373 ISTVVLMLISEITQLPPPGQVAFVQKHNAKSSDSS-QKSQCSSNNNVTLSEVHGR 212
++TV+ ML SE + LP P Q AF+ + +SS Q +S NNV+L+++ GR
Sbjct: 755 VATVIWMLSSENSNLPEPKQPAFIPRRGTSEVESSGQSDPRASINNVSLTKITGR 809
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 444,409,061
Number of Sequences: 1393205
Number of extensions: 8814552
Number of successful extensions: 21515
Number of sequences better than 10.0: 495
Number of HSP's better than 10.0 without gapping: 20880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21385
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
