Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001263A_C02 KMC001263A_c02
(730 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF73006.1|AF262997_1 NADP-dependent malic protein [Ricinus c... 196 2e-49
dbj|BAB20887.1| NADP dependent malic enzyme [Oryza sativa (japon... 191 7e-48
dbj|BAB89496.1| P0022F10.12 [Oryza sativa (japonica cultivar-gro... 191 7e-48
gb|AAB19243.1| NADP-malic enzyme [Flaveria trinervia] 191 1e-47
pir||S17455 malate dehydrogenase (oxaloacetate-decarboxylating) ... 190 2e-47
>gb|AAF73006.1|AF262997_1 NADP-dependent malic protein [Ricinus communis]
Length = 641
Score = 196 bits (499), Expect = 2e-49
Identities = 96/112 (85%), Positives = 107/112 (94%)
Frame = -2
Query: 729 VPYDDKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAEQVTQEHFDKGLI 550
V Y+ KV+VPGQANNAYIFPGFGLGLIMSGTIRVHDD+LLAASEALA QVTQE+FDKGLI
Sbjct: 528 VEYEGKVYVPGQANNAYIFPGFGLGLIMSGTIRVHDDMLLAASEALAAQVTQENFDKGLI 587
Query: 549 FPPFTNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVKFAESCMYSPSLQN 394
+PPFTNIRKISA+IAA VAAKAYELGLA+RLPQPKDLVK+AESCMYSP+ ++
Sbjct: 588 YPPFTNIRKISANIAANVAAKAYELGLASRLPQPKDLVKYAESCMYSPAYRS 639
>dbj|BAB20887.1| NADP dependent malic enzyme [Oryza sativa (japonica
cultivar-group)]
Length = 496
Score = 191 bits (486), Expect = 7e-48
Identities = 91/112 (81%), Positives = 104/112 (92%)
Frame = -2
Query: 729 VPYDDKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAEQVTQEHFDKGLI 550
V YD K++VPGQANNAYIFPGFGLG++MSG IRVHDD+LLAASEALA+QVTQE+FDKGL
Sbjct: 383 VEYDGKIYVPGQANNAYIFPGFGLGVVMSGAIRVHDDMLLAASEALAQQVTQENFDKGLT 442
Query: 549 FPPFTNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVKFAESCMYSPSLQN 394
+PPF+NIRKISAHIAA VAAKAYELGLA+R P+PKDLVK+AESCMYSP +N
Sbjct: 443 YPPFSNIRKISAHIAANVAAKAYELGLASRRPRPKDLVKYAESCMYSPLYRN 494
>dbj|BAB89496.1| P0022F10.12 [Oryza sativa (japonica cultivar-group)]
Length = 593
Score = 191 bits (486), Expect = 7e-48
Identities = 91/112 (81%), Positives = 104/112 (92%)
Frame = -2
Query: 729 VPYDDKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAEQVTQEHFDKGLI 550
V YD K++VPGQANNAYIFPGFGLG++MSG IRVHDD+LLAASEALA+QVTQE+FDKGL
Sbjct: 480 VEYDGKIYVPGQANNAYIFPGFGLGVVMSGAIRVHDDMLLAASEALAQQVTQENFDKGLT 539
Query: 549 FPPFTNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVKFAESCMYSPSLQN 394
+PPF+NIRKISAHIAA VAAKAYELGLA+R P+PKDLVK+AESCMYSP +N
Sbjct: 540 YPPFSNIRKISAHIAANVAAKAYELGLASRRPRPKDLVKYAESCMYSPLYRN 591
>gb|AAB19243.1| NADP-malic enzyme [Flaveria trinervia]
Length = 188
Score = 191 bits (484), Expect = 1e-47
Identities = 93/108 (86%), Positives = 103/108 (95%)
Frame = -2
Query: 729 VPYDDKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAEQVTQEHFDKGLI 550
V Y+ K++V GQANNAYIFPGFGLGLI+SG IRVHDD+LLAASEALAEQVTQEHFDKGLI
Sbjct: 75 VEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAEQVTQEHFDKGLI 134
Query: 549 FPPFTNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVKFAESCMYSP 406
FPPFT+IRKISAHIAAKVAAKAYELGLA+RLPQP++LV +AESCMYSP
Sbjct: 135 FPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSP 182
>pir||S17455 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP) (EC
1.1.1.40) - Flaveria linearis (fragment)
gi|1679884|gb|AAB41026.1| NADP-malic enzyme [Flaveria
linearis]
Length = 347
Score = 190 bits (483), Expect = 2e-47
Identities = 92/112 (82%), Positives = 104/112 (92%)
Frame = -2
Query: 729 VPYDDKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAEQVTQEHFDKGLI 550
V Y+ KV+V GQ+NNAYIFPGFGLGLI+SG IRVHD++LLAASEALAEQVTQEHFD GLI
Sbjct: 234 VEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLI 293
Query: 549 FPPFTNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVKFAESCMYSPSLQN 394
+PPFTNIRKISAHIAAKVAAKAYELGLA+RLPQP++LV +AESCMYSP +N
Sbjct: 294 YPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRN 345
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 650,726,867
Number of Sequences: 1393205
Number of extensions: 14395385
Number of successful extensions: 36458
Number of sequences better than 10.0: 259
Number of HSP's better than 10.0 without gapping: 34652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36427
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34343566934
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
