Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001261A_C01 KMC001261A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_014442.1| anchorage subunit of a-agglutinin; Aga1p [Sacch... 43 0.003
ref|NP_596690.1| hypothetical serine-rich secreted protein [Schi... 41 0.012
ref|XP_209582.1| hypothetical protein XP_209582 [Homo sapiens] 40 0.015
dbj|BAC03887.1| unnamed protein product [Homo sapiens] 40 0.015
ref|NP_594395.1| hypothetical serine-rich protein. [Schizosaccha... 40 0.020
>ref|NP_014442.1| anchorage subunit of a-agglutinin; Aga1p [Saccharomyces cerevisiae]
gi|416592|sp|P32323|AGA1_YEAST A-AGGLUTININ ATTACHMENT
SUBUNIT PRECURSOR gi|101170|pir||A41258 a-agglutinin
core protein AGA1 - yeast (Saccharomyces cerevisiae)
gi|170964|gb|AAA34382.1| a-agglutinin core subunit
gi|1302552|emb|CAA96325.1| ORF YNR044w [Saccharomyces
cerevisiae]
Length = 725
Score = 42.7 bits (99), Expect = 0.003
Identities = 25/55 (45%), Positives = 32/55 (57%)
Frame = +1
Query: 313 SSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S+ S P +L + + PSS TSPS +S+S SS + SSS STSSS T S
Sbjct: 175 STTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPS 229
Score = 37.4 bits (85), Expect = 0.13
Identities = 25/55 (45%), Positives = 31/55 (55%)
Frame = +1
Query: 316 SESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSSL 480
S + T P +T + PSS TS S +S+S SS + SSS STS S T SSL
Sbjct: 187 SSTSTSPSST----STSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSL 237
Score = 35.0 bits (79), Expect = 0.65
Identities = 24/59 (40%), Positives = 31/59 (51%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSSL 480
S SS + T P +T + SS TSPS S+S SS + SS STS SL + +L
Sbjct: 253 STSSSSTSTSPSST----STSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTL 307
Score = 34.3 bits (77), Expect = 1.1
Identities = 22/59 (37%), Positives = 32/59 (53%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSSL 480
S +S S++ + + + PSS TS S +S+S SS + S+S STSS T SL
Sbjct: 242 SSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSL 300
Score = 33.9 bits (76), Expect = 1.4
Identities = 22/58 (37%), Positives = 30/58 (50%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S +S S + + + + PSS TS S +S+S SS + S S STSSS T S
Sbjct: 207 SSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPS 264
Score = 33.5 bits (75), Expect = 1.9
Identities = 27/59 (45%), Positives = 32/59 (53%), Gaps = 1/59 (1%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLI-TSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS + T P +T S SSL TS S +S+S SS + SSS STS S T SS
Sbjct: 218 STSSSSTSTSPSST-----STSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSS 271
Score = 33.5 bits (75), Expect = 1.9
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS + T +T + SS TSPS +S+S S + SSS STS S T SS
Sbjct: 204 STSSSSTSTSSSST----STSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSS 257
Score = 32.3 bits (72), Expect = 4.2
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKS 474
S SS + T +T + SS TSPS +S+S SS + S S STS+S T S
Sbjct: 239 STSSSSTSTSQSST----STSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSS 291
>ref|NP_596690.1| hypothetical serine-rich secreted protein [Schizosaccharomyces
pombe] gi|7493381|pir||T39903 serine-rich protein -
fission yeast (Schizosaccharomyces pombe)
gi|3873550|emb|CAA22127.1| hypothetical serine-rich
secreted protein [Schizosaccharomyces pombe]
Length = 534
Score = 40.8 bits (94), Expect = 0.012
Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Frame = +1
Query: 181 ST*PLTPPAVSICKAAISKK*CSLQMQTRSLH*SNYKWIF*SEESSESETPPFATLFAM- 357
S+ P T + S +++S S T S S+ I S SS S T +T+ +
Sbjct: 238 SSIPSTSSSSSSTSSSLSS---SSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSS 294
Query: 358 -----PSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSL--IPTKSS 477
P+ SS I+S S SSSSFSS TLSSS S+SSS PT SS
Sbjct: 295 SSSSSPTSTSSTISSSSSSSSSFSS-TLSSSSMSSSSSFSSSPTSSS 340
Score = 40.0 bits (92), Expect = 0.020
Identities = 29/62 (46%), Positives = 38/62 (60%), Gaps = 4/62 (6%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSL----ITSPSKSSSSFSSMTLSSSKASTSSSLIPTK 471
S S S T +T+ + S PSS TS SKSSSSFSS T+SSS +++SS+L +
Sbjct: 329 SSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSS-TVSSSSSTSSSTLTSSS 387
Query: 472 SS 477
SS
Sbjct: 388 SS 389
Score = 34.7 bits (78), Expect = 0.85
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSL---ITSPS-KSSSSFSSMTLSSSKASTSSSLIPTK 471
S SS S T +T+ + S SS ++S S SSSSFSS SSS +SSS P+
Sbjct: 293 SSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSS 352
Query: 472 SS 477
SS
Sbjct: 353 SS 354
Score = 33.1 bits (74), Expect = 2.5
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 313 SSESETPPFATLFAMPS--EPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
SS S + F++ + S SS +SP+ SSS+ SS + S S +S SS+ +KSS
Sbjct: 309 SSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSS 365
Score = 33.1 bits (74), Expect = 2.5
Identities = 29/85 (34%), Positives = 43/85 (50%)
Frame = +1
Query: 313 SSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSSLIHLL 492
SS S + ++ + S P+S ++ S SSSS SS T +SS S+SSS + SS +
Sbjct: 265 SSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSS 324
Query: 493 EGTPL*LISQFP*SYSTA*AFSSDS 567
+ S P S S+ + SS S
Sbjct: 325 SMSSSSSFSSSPTSSSSTISSSSSS 349
Score = 33.1 bits (74), Expect = 2.5
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S +P + S SS S + SSSS SS + SS ++SSS I + SS
Sbjct: 291 SSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSS 348
Score = 32.7 bits (73), Expect = 3.2
Identities = 25/61 (40%), Positives = 32/61 (51%)
Frame = +1
Query: 298 F*SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
F S SS S + P + + + S+ TS S S S SS+ SSS S+SSS T SS
Sbjct: 175 FSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSS 234
Query: 478 L 480
L
Sbjct: 235 L 235
Score = 32.3 bits (72), Expect = 4.2
Identities = 22/65 (33%), Positives = 34/65 (51%), Gaps = 7/65 (10%)
Frame = +1
Query: 313 SSESETPPFATLFAMPSEPSSLITS-------PSKSSSSFSSMTLSSSKASTSSSLIPTK 471
SS+S + +T+ + S SS +TS P+ SSS SS++ S +S+ SS P
Sbjct: 361 SSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVS 420
Query: 472 SSLIH 486
S+ H
Sbjct: 421 SAFYH 425
Score = 32.3 bits (72), Expect = 4.2
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKS--SSSFSSMTLSSSKASTSSSLIPTKSS 477
S S S ++ + P+ SS I+S S S SSSFSS T SSSK+S+S S + SS
Sbjct: 318 SSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTT-SSSKSSSSFSSTVSSSS 376
Score = 32.0 bits (71), Expect = 5.5
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 316 SESETPPFATLFAMPSEPSSLITSPSKSSSSFS-SMTLSSSKASTSSSLIPTKSSLI 483
S S +P ++ + S S + PS SSSS S S +LSSS +S+++S + SS+I
Sbjct: 217 SSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSII 273
Score = 32.0 bits (71), Expect = 5.5
Identities = 22/58 (37%), Positives = 34/58 (57%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + ++ + S PS+ +S S SSS SS + S++ +S+SSS I + SS
Sbjct: 220 SSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSS 277
Score = 31.6 bits (70), Expect = 7.2
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = +1
Query: 106 EVGLQSPQLKEAYSMVHFAWIIYTKST*PLTPPAVSICKAAISKK*CSLQMQTRSLH*SN 285
EV + S L + + + + ST P S + S + T S + S+
Sbjct: 156 EVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSS---AAPTSTSSSYLSS 212
Query: 286 YKWIF*SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSS-----SKASTS 450
+ S S S + +TL + SS+ ++ S SSS+ SS++ SS S +S+S
Sbjct: 213 SSVVSSSSSPSSSSS---STLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSS 269
Query: 451 SSLIPTKSS 477
SS+I + SS
Sbjct: 270 SSIISSSSS 278
Score = 31.2 bits (69), Expect = 9.4
Identities = 21/59 (35%), Positives = 32/59 (53%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSSL 480
S S S P ++ + S S +S S +SSS SS ++ SS +S+SSS T S++
Sbjct: 232 SSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTI 290
>ref|XP_209582.1| hypothetical protein XP_209582 [Homo sapiens]
Length = 252
Score = 40.4 bits (93), Expect = 0.015
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
+ SS S + P ++ + S PSS +SPS SSSS SS SSS + +SSS + SS
Sbjct: 107 NSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSS 164
Score = 40.4 bits (93), Expect = 0.015
Identities = 26/58 (44%), Positives = 35/58 (59%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ + S PSS +S S SSSS SS + SSS + +SSS P+ SS
Sbjct: 82 SPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSS 139
Score = 39.7 bits (91), Expect = 0.026
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ + SS +SPS SSSS SS SS+ +S+SSS P+ SS
Sbjct: 64 SPSSSPSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSS 121
Score = 38.1 bits (87), Expect = 0.077
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSS 456
S S S + P ++ + S PSS +SPS SSSS SS + S S +S SSS
Sbjct: 125 SSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSS 175
Score = 37.7 bits (86), Expect = 0.10
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ + S SS +S S SSSS SS + S S +S+SSS P+ SS
Sbjct: 93 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSS 150
Score = 37.4 bits (85), Expect = 0.13
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ + S SS +SPS SSSS SS + SSS +S+S S SS
Sbjct: 118 SSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSS 175
Score = 36.2 bits (82), Expect = 0.29
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S +P ++ + S PSS +SPS SSSS SS + S S S+S S + +S
Sbjct: 158 SSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTS 215
Score = 36.2 bits (82), Expect = 0.29
Identities = 24/56 (42%), Positives = 34/56 (59%), Gaps = 1/56 (1%)
Frame = +1
Query: 313 SSESETPPFATLFAMPSEPSSLITS-PSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S S +P ++ + PS SS +S PS S+SS SS + S S +S+SSS P+ SS
Sbjct: 77 SHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSS 132
Score = 34.3 bits (77), Expect = 1.1
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + ++ S PSS +SPS S+SS SS SSS +S+SSS P SS
Sbjct: 151 SSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS--SSSPSSSSSSPSPRSSS 206
Score = 33.9 bits (76), Expect = 1.4
Identities = 23/55 (41%), Positives = 31/55 (55%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPT 468
S SS S +P ++ S PS +SPS SSSS SS + SS +S+ SS P+
Sbjct: 184 SSPSSSSSSPSSSS-----SSPSPRSSSPSSSSSSTSSPSSSSPSSSSPSSSCPS 233
Score = 33.1 bits (74), Expect = 2.5
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +1
Query: 313 SSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S S +P + + PS SS + S SSSS SS + S+S +S+SSS + SS
Sbjct: 68 SPSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSS 122
Score = 33.1 bits (74), Expect = 2.5
Identities = 23/58 (39%), Positives = 32/58 (54%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ SS +S S SSS+ SS + SSS +S+SSS + SS
Sbjct: 73 SPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSS 130
Score = 33.1 bits (74), Expect = 2.5
Identities = 26/58 (44%), Positives = 32/58 (54%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S +P ++ S PSS +S S SSSS SS + SSS +S SSS SS
Sbjct: 137 SSSSSSSSSPSSSS-----SSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS 189
Score = 32.0 bits (71), Expect = 5.5
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + ++ + S SS +SPS SS S S + SSS +S SSS SS
Sbjct: 139 SSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSS 196
Score = 31.6 bits (70), Expect = 7.2
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS + +P ++ S PSS +SPS SSS SS SSS S+ SS P+ SS
Sbjct: 177 SSPSSSNSSPSSSS-----SSPSSSSSSPSPRSSSPSS---SSSSTSSPSSSSPSSSS 226
Score = 31.6 bits (70), Expect = 7.2
Identities = 22/58 (37%), Positives = 30/58 (50%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S +P + + S S +S S SSS SS + SS +S+SSS + SS
Sbjct: 94 SSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSS 151
>dbj|BAC03887.1| unnamed protein product [Homo sapiens]
Length = 258
Score = 40.4 bits (93), Expect = 0.015
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
+ SS S + P ++ + S PSS +SPS SSSS SS SSS + +SSS + SS
Sbjct: 108 NSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSS 165
Score = 38.5 bits (88), Expect = 0.059
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + +T S SS +SPS S+SS SS + S S +S+SSS P+ SS
Sbjct: 76 SSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSS 133
Score = 38.5 bits (88), Expect = 0.059
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +1
Query: 313 SSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
SS + +P ++ + S PSS +S S SSSS SS + SSS + +SSS P+ SS
Sbjct: 86 SSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSS 140
Score = 38.1 bits (87), Expect = 0.077
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSS 456
S S S + P ++ + S PSS +SPS SSSS SS + S S +S SSS
Sbjct: 126 SSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSS 176
Score = 37.7 bits (86), Expect = 0.10
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ + SS +SPS SSSS SS + SSS +S+SSS SS
Sbjct: 64 SPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSS 121
Score = 37.7 bits (86), Expect = 0.10
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ + S SS +S S SSSS SS + S S +S+SSS P+ SS
Sbjct: 94 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSS 151
Score = 37.4 bits (85), Expect = 0.13
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ + S SS +SPS SSSS SS + SSS +S+S S SS
Sbjct: 119 SSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSS 176
Score = 36.2 bits (82), Expect = 0.29
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S +P ++ + S PSS +SPS SSSS SS + S S S+S S + +S
Sbjct: 159 SSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTS 216
Score = 35.4 bits (80), Expect = 0.50
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKS 474
S SS S +P ++ S PS +SPS SSSS SS + SS +S+ SS P+ S
Sbjct: 185 SSPSSSSSSPSSSS-----SSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPSSS 236
Score = 34.3 bits (77), Expect = 1.1
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + ++ S PSS +SPS S+SS SS SSS +S+SSS P SS
Sbjct: 152 SSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS--SSSPSSSSSSPSPRSSS 207
Score = 33.5 bits (75), Expect = 1.9
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + P ++ + S PSS +S S SS S S+ + SSS +S SSS + SS
Sbjct: 73 SPSSSHSSSSPSSS--SSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSS 128
Score = 33.1 bits (74), Expect = 2.5
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTS--SSLIPTKSS 477
S SS + +P ++ S PSS +SPS SSS SS + S+S STS SS P+ SS
Sbjct: 178 SSPSSSNSSPSSSS-----SSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSS 232
Score = 33.1 bits (74), Expect = 2.5
Identities = 23/57 (40%), Positives = 32/57 (55%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKS 474
S SS S + ++ + S PSS +SPS SSSS S + S S +S+S+S T S
Sbjct: 166 SSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSS 222
Score = 33.1 bits (74), Expect = 2.5
Identities = 26/58 (44%), Positives = 32/58 (54%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S +P ++ S PSS +S S SSSS SS + SSS +S SSS SS
Sbjct: 138 SSSSSSSSSPSSSS-----SSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS 190
Score = 32.0 bits (71), Expect = 5.5
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S + ++ + S SS +SPS SS S S + SSS +S SSS SS
Sbjct: 140 SSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSS 197
Score = 31.6 bits (70), Expect = 7.2
Identities = 22/58 (37%), Positives = 30/58 (50%)
Frame = +1
Query: 304 SEESSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSSLIPTKSS 477
S SS S +P + + S S +S S SSS SS + SS +S+SSS + SS
Sbjct: 95 SSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSS 152
>ref|NP_594395.1| hypothetical serine-rich protein. [Schizosaccharomyces pombe]
gi|3915439|sp|O13695|YEN1_SCHPO Hypothetical serine-rich
protein C11G7.01 in chromosome I gi|7492035|pir||T37544
hypothetical serine-rich protein - fission yeast
(Schizosaccharomyces pombe) gi|2408006|emb|CAB16206.1|
hypothetical serine-rich protein. [Schizosaccharomyces
pombe]
Length = 536
Score = 40.0 bits (92), Expect = 0.020
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +1
Query: 313 SSESETPPFATLFAMPSEPS---SLITSPSKSSSSFSSMTLSSSKAS--TSSSLIPTKSS 477
SS S +P ++ F P+ S SL++S S+ SSS S+ SSS A+ +SSS PT SS
Sbjct: 59 SSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSS 118
Query: 478 LIHLLEGTPL*LIS 519
H L + L++
Sbjct: 119 SSHALSSSSSSLVA 132
Score = 32.3 bits (72), Expect = 4.2
Identities = 20/48 (41%), Positives = 28/48 (57%)
Frame = +1
Query: 313 SSESETPPFATLFAMPSEPSSLITSPSKSSSSFSSMTLSSSKASTSSS 456
SS + ++ A+ S SSL+ S S S S SS++ SSS S+SSS
Sbjct: 109 SSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSS 156
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 499,415,474
Number of Sequences: 1393205
Number of extensions: 11311146
Number of successful extensions: 76643
Number of sequences better than 10.0: 660
Number of HSP's better than 10.0 without gapping: 43088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61617
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
