Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001253A_C01 KMC001253A_c01
(639 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA75588.1| cycloartenol synthase [Medicago truncatula] 223 1e-57
dbj|BAB83087.1| lupeol synthase [Betula platyphylla] 223 1e-57
dbj|BAA86930.1| lupeol synthase [Olea europaea] 220 1e-56
dbj|BAA86932.1| lupeol synthase [Taraxacum officinale] 208 6e-53
gb|AAF03375.1|AF169966_1 putative cycloartenol synthase [Oryza s... 190 1e-47
>emb|CAA75588.1| cycloartenol synthase [Medicago truncatula]
Length = 472
Score = 223 bits (569), Expect = 1e-57
Identities = 106/134 (79%), Positives = 125/134 (93%)
Frame = -1
Query: 627 EDFQNSVTLRRACKFLLSKQLPNGGWGESYLSSQDKVYTNIEGKRANLVQSSWALLSLMR 448
+++ NS +LR+AC+FLLSKQLP+GGWGESYLSSQ+KVYTN+E RANLVQ+SWALLSL+
Sbjct: 339 KNYHNSPSLRKACQFLLSKQLPDGGWGESYLSSQNKVYTNLEDNRANLVQTSWALLSLIS 398
Query: 447 AGQAEIDPTPIHRGIRLLINSQMDDGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEY 268
AGQA+IDPTPIHRG++L+INSQM+DGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEY
Sbjct: 399 AGQADIDPTPIHRGMKLIINSQMEDGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEY 458
Query: 267 RRRVLCA**SPNAS 226
R +VL A +PNA+
Sbjct: 459 RHQVLSA-QTPNAA 471
>dbj|BAB83087.1| lupeol synthase [Betula platyphylla]
Length = 755
Score = 223 bits (569), Expect = 1e-57
Identities = 105/126 (83%), Positives = 119/126 (94%)
Frame = -1
Query: 624 DFQNSVTLRRACKFLLSKQLPNGGWGESYLSSQDKVYTNIEGKRANLVQSSWALLSLMRA 445
+++N LR++C+FLLSKQLPNGGWGESYLSSQ+KV+TNIEG RANLVQ++WALLSL+ A
Sbjct: 630 NYKNCPALRKSCEFLLSKQLPNGGWGESYLSSQNKVWTNIEGNRANLVQTAWALLSLIDA 689
Query: 444 GQAEIDPTPIHRGIRLLINSQMDDGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEYR 265
QAEIDPTPIHRG+R+LINSQM+DGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEYR
Sbjct: 690 RQAEIDPTPIHRGVRVLINSQMEDGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEYR 749
Query: 264 RRVLCA 247
RRVL A
Sbjct: 750 RRVLFA 755
>dbj|BAA86930.1| lupeol synthase [Olea europaea]
Length = 758
Score = 220 bits (561), Expect = 1e-56
Identities = 101/127 (79%), Positives = 118/127 (92%)
Frame = -1
Query: 627 EDFQNSVTLRRACKFLLSKQLPNGGWGESYLSSQDKVYTNIEGKRANLVQSSWALLSLMR 448
+++ NS TLRRAC+FLLSKQLP+GGW ESYLSS +KVYTN+EG R+NLVQ+SWALLSL++
Sbjct: 630 KNYHNSPTLRRACEFLLSKQLPDGGWSESYLSSSNKVYTNLEGNRSNLVQTSWALLSLIK 689
Query: 447 AGQAEIDPTPIHRGIRLLINSQMDDGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEY 268
AGQ EIDP PIHRGI+LL+NSQM+DGDFPQ+EITG FM+NCTLNYSSYRNIFPIWALGEY
Sbjct: 690 AGQVEIDPGPIHRGIKLLVNSQMEDGDFPQEEITGAFMKNCTLNYSSYRNIFPIWALGEY 749
Query: 267 RRRVLCA 247
RRR+L A
Sbjct: 750 RRRILHA 756
>dbj|BAA86932.1| lupeol synthase [Taraxacum officinale]
Length = 758
Score = 208 bits (529), Expect = 6e-53
Identities = 95/124 (76%), Positives = 113/124 (90%)
Frame = -1
Query: 627 EDFQNSVTLRRACKFLLSKQLPNGGWGESYLSSQDKVYTNIEGKRANLVQSSWALLSLMR 448
+++ N L++ACKFLLSKQLP+GGWGESYLSS +KVYTN+EG R+NLV +SWAL+SL++
Sbjct: 632 KNYHNCPALQKACKFLLSKQLPDGGWGESYLSSSNKVYTNLEGNRSNLVHTSWALISLIK 691
Query: 447 AGQAEIDPTPIHRGIRLLINSQMDDGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEY 268
AGQAEIDPTPI G+RLLINSQM++GDFPQQEITGVFM+NC LNYSS+RNIFPIWALGEY
Sbjct: 692 AGQAEIDPTPISNGVRLLINSQMEEGDFPQQEITGVFMKNCNLNYSSFRNIFPIWALGEY 751
Query: 267 RRRV 256
RR V
Sbjct: 752 RRIV 755
>gb|AAF03375.1|AF169966_1 putative cycloartenol synthase [Oryza sativa]
Length = 757
Score = 190 bits (483), Expect = 1e-47
Identities = 86/125 (68%), Positives = 106/125 (84%)
Frame = -1
Query: 621 FQNSVTLRRACKFLLSKQLPNGGWGESYLSSQDKVYTNIEGKRANLVQSSWALLSLMRAG 442
F+NS +R+AC FLLSK+LP+GGWGESYLSSQD+VYTN+EGKR + V + WA+L+L+ AG
Sbjct: 631 FKNSPAIRKACDFLLSKELPSGGWGESYLSSQDQVYTNLEGKRPHAVNTGWAMLALIDAG 690
Query: 441 QAEIDPTPIHRGIRLLINSQMDDGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEYRR 262
QAE DP P+HR ++LIN Q +DG+FPQQEI GVF +NC ++YS YRNIFPIWALGEYRR
Sbjct: 691 QAERDPIPLHRAAKVLINLQSEDGEFPQQEIIGVFNKNCMISYSEYRNIFPIWALGEYRR 750
Query: 261 RVLCA 247
RVL A
Sbjct: 751 RVLAA 755
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,881,826
Number of Sequences: 1393205
Number of extensions: 11574649
Number of successful extensions: 24085
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 23076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23964
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26723359358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
