Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001219A_C01 KMC001219A_c01
(525 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S68805 pectin acetylesterase (EC 3.1.1.-) precursor - mung ... 246 9e-72
ref|NP_193677.2| pectinacetylesterase family; protein id: At4g19... 206 2e-52
gb|AAM65412.1| pectin acetylesterase [Arabidopsis thaliana] 192 2e-48
ref|NP_199341.1| pectinacetylesterase, putative; protein id: At5... 192 3e-48
gb|AAL07047.1| putative pectin acetylesterase [Arabidopsis thali... 192 3e-48
>pir||S68805 pectin acetylesterase (EC 3.1.1.-) precursor - mung bean
gi|1431629|emb|CAA67728.1| pectinacetylesterase
precursor [Vigna radiata]
Length = 399
Score = 246 bits (629), Expect(2) = 9e-72
Identities = 112/132 (84%), Positives = 121/132 (90%)
Frame = +1
Query: 130 KSAVAKGAVCLDGSPPAYHFHKGFGAGISNWIVHFEGGAWCNNVTTCLARRDTRLGSSKK 309
++AVAKGAVCLDGSPPAYHFHKG GAGI+NWIVHFEGG WCNNVT+CL+RRDTRLGSSKK
Sbjct: 33 ENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTSCLSRRDTRLGSSKK 92
Query: 310 MSQTLSLSGFFSNGQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGGRIFVA 489
M LS SGFFSN +KFNPDFY+WNRIKVRYCDGSSFTGDVEAVDP TNLHFRG R+F A
Sbjct: 93 MDTQLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGSRVFAA 152
Query: 490 VVEDLLANGMKN 525
VV+DLLA GMKN
Sbjct: 153 VVDDLLAKGMKN 164
Score = 45.4 bits (106), Expect(2) = 9e-72
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +3
Query: 51 GQWLSLLLCLLLLLKAEGVAVPITFVQ 131
GQWLS+L+C++LLLKAEGV V ITFV+
Sbjct: 7 GQWLSVLICVVLLLKAEGVPVGITFVE 33
>ref|NP_193677.2| pectinacetylesterase family; protein id: At4g19420.1 [Arabidopsis
thaliana]
Length = 397
Score = 206 bits (523), Expect = 2e-52
Identities = 92/142 (64%), Positives = 117/142 (81%), Gaps = 1/142 (0%)
Frame = +1
Query: 103 ELLFQSLLF-KSAVAKGAVCLDGSPPAYHFHKGFGAGISNWIVHFEGGAWCNNVTTCLAR 279
E LF ++ F ++AVAKGAVCLDGSPPAYH +G G GI++W++ EGG WCNNVT C++R
Sbjct: 21 EGLFVNITFVRNAVAKGAVCLDGSPPAYHLDRGSGTGINSWLIQLEGGGWCNNVTNCVSR 80
Query: 280 RDTRLGSSKKMSQTLSLSGFFSNGQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNL 459
TRLGSSKKM + L+ S SN +++NPDFYNWNR+KVRYCDG+SFTGDVEAV+P TNL
Sbjct: 81 MHTRLGSSKKMVENLAFSAILSNKKQYNPDFYNWNRVKVRYCDGASFTGDVEAVNPATNL 140
Query: 460 HFRGGRIFVAVVEDLLANGMKN 525
HFRG R+++AV+++LLA GM N
Sbjct: 141 HFRGARVWLAVMQELLAKGMIN 162
Score = 31.6 bits (70), Expect = 5.9
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 54 QWLSLLLCLLLLLKAEGVAVPITFVQ 131
QWL L+C L+++ EG+ V ITFV+
Sbjct: 6 QWLIYLVCSLVIMNTEGLFVNITFVR 31
>gb|AAM65412.1| pectin acetylesterase [Arabidopsis thaliana]
Length = 391
Score = 192 bits (489), Expect = 2e-48
Identities = 85/132 (64%), Positives = 101/132 (76%)
Frame = +1
Query: 130 KSAVAKGAVCLDGSPPAYHFHKGFGAGISNWIVHFEGGAWCNNVTTCLARRDTRLGSSKK 309
+SAVAKGAVCLDGS PAYHF KG G+G++NWIVH EGG WC ++ TC+ R+ T GSSK
Sbjct: 30 ESAVAKGAVCLDGSAPAYHFDKGSGSGVNNWIVHMEGGGWCTDIATCVQRKSTMKGSSKL 89
Query: 310 MSQTLSLSGFFSNGQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGGRIFVA 489
M++ SG Q NPDFYNWNRIKVRYCDGSSFTGD+EAVDP L FRG R++ A
Sbjct: 90 MNKDFGFSGILGGKQSTNPDFYNWNRIKVRYCDGSSFTGDIEAVDPANKLFFRGARVWRA 149
Query: 490 VVEDLLANGMKN 525
V++DL+A GM N
Sbjct: 150 VIDDLMAKGMSN 161
>ref|NP_199341.1| pectinacetylesterase, putative; protein id: At5g45280.1, supported
by cDNA: 39005., supported by cDNA: gi_16323122
[Arabidopsis thaliana] gi|10176999|dbj|BAB10249.1|
pectin acetylesterase [Arabidopsis thaliana]
gi|16323123|gb|AAL15296.1| AT5g45280/K9E15_6
[Arabidopsis thaliana]
Length = 391
Score = 192 bits (487), Expect = 3e-48
Identities = 85/132 (64%), Positives = 101/132 (76%)
Frame = +1
Query: 130 KSAVAKGAVCLDGSPPAYHFHKGFGAGISNWIVHFEGGAWCNNVTTCLARRDTRLGSSKK 309
+SAVAKGAVCLDGS PAYHF KG G+G++NWIVH EGG WC ++ TC+ R+ T GSSK
Sbjct: 30 ESAVAKGAVCLDGSAPAYHFDKGSGSGVNNWIVHMEGGGWCTDIATCVQRKSTMKGSSKL 89
Query: 310 MSQTLSLSGFFSNGQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGGRIFVA 489
M++ SG Q NPDFYNWNRIKVRYCDGSSFTGD+EAVDP L FRG R++ A
Sbjct: 90 MNKDFGFSGILGGKQSTNPDFYNWNRIKVRYCDGSSFTGDIEAVDPTHKLFFRGARVWRA 149
Query: 490 VVEDLLANGMKN 525
V++DL+A GM N
Sbjct: 150 VIDDLMAKGMSN 161
>gb|AAL07047.1| putative pectin acetylesterase [Arabidopsis thaliana]
gi|23297554|gb|AAN12894.1| putative pectin
acetylesterase [Arabidopsis thaliana]
Length = 370
Score = 192 bits (487), Expect = 3e-48
Identities = 85/132 (64%), Positives = 101/132 (76%)
Frame = +1
Query: 130 KSAVAKGAVCLDGSPPAYHFHKGFGAGISNWIVHFEGGAWCNNVTTCLARRDTRLGSSKK 309
+SAVAKGAVCLDGS PAYHF KG G+G++NWIVH EGG WC ++ TC+ R+ T GSSK
Sbjct: 30 ESAVAKGAVCLDGSAPAYHFDKGSGSGVNNWIVHMEGGGWCTDIATCVQRKSTMKGSSKL 89
Query: 310 MSQTLSLSGFFSNGQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGGRIFVA 489
M++ SG Q NPDFYNWNRIKVRYCDGSSFTGD+EAVDP L FRG R++ A
Sbjct: 90 MNKDFGFSGILGGKQSTNPDFYNWNRIKVRYCDGSSFTGDIEAVDPTHKLFFRGARVWRA 149
Query: 490 VVEDLLANGMKN 525
V++DL+A GM N
Sbjct: 150 VIDDLMAKGMSN 161
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,377,669
Number of Sequences: 1393205
Number of extensions: 9831012
Number of successful extensions: 27687
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 27050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27656
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
