>KMC001197A_C01 KMC001197A_c01
ataaaaataaaacatattAATATAATGGTATAGTGAGACCGGATGAATAGTGCTTAAGCA
CATGTGGCAGTACAGACCCACATGAATAGTGCTAAAAACTAAGAATTAAGAACTAGCATT
GGAAATGCTCTTATATACTCTTTCCGTCCCCATTTATAAGTCGCTTTTACCTAATTCTCT
CGGATTAAGAAAAGAAGTTGCTAGTATTAAATTTGTAAAAAGTCTGATTCTGTTTCTTAG
GTTACCCATCAACTTCTCTCTCCAAATTACTATTTTCTTTTCAAAATTACATTGTCTCTT
TCATATTAATGATGAGGGTAAATTGGGAAAAAAGCATTACATGCTTCATTGATATTATAA
AGTGATTATATTTTGGGACTAAGAAAACTCTCAGAAAGTGACTTATATACGGGGACGGAG
GGAGTAACTTGTATGATGATTCCCGATGCCATACTCATTCAATCCGCACCACAGAGATGA
GTTGAGAATGTTGGGTATTGTGAATCTGGAAGAGATCACTACCAATGGCTAACAGTCAAT
AATTTACAGCTTCATCTTTCAGAAAAGAGCAATCAACAAAATTTTACAAATTTAACATGA
AATGGAATTTCCATGCATGTTTACCAAGAGAGTAGTTATAATCACGCGAGCAGCTCGAAG
TGCACCGATAAGAATTGCCGCGCACAGCTCACATCACTTGTCAAGAATCAGAGAACTTCT
CTCAATGAGATGGAAGTAGTCAATGAATTAATCCGTCCTTCAGCAACGTGGGAAGATGCT
ATATACCATGACCAGTTGTTTCATATTTGTTTTCATTACCTCGGTGATGTAGACGACACC
ACCGCAACTTGTATGAGTGGACATCCCGGAAGTTTTGTTAATTCTGGACTTCCTTGAAGA
AGGGATGCTCTTTGGGGATTTGATAGCATAACTTGTTGCATGTCCTTTGAAAGAACATTA
AAAACTGCCTGAAGGTCCCCCCTAAGTTTCTGACAAATTTCCATGGAATCAACACCACCC
TTTCCAG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC001197A_C01 KMC001197A_c01
         (1027 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_177533.1| unknown protein; protein id: At1g73930.1 [Arabi...    61  2e-08
gb|ZP_00109767.1| hypothetical protein [Nostoc punctiforme]            33  7.2
ref|XP_223715.1| similar to microtubule-associated protein EMAP ...    33  9.4

>ref|NP_177533.1| unknown protein; protein id: At1g73930.1 [Arabidopsis thaliana]
            gi|25406305|pir||H96766 unknown protein F2P9.20
            [imported] - Arabidopsis thaliana
            gi|12325141|gb|AAG52517.1|AC016662_11 unknown protein;
            75644-77831 [Arabidopsis thaliana]
          Length = 623

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 32/47 (68%), Positives = 36/47 (76%)
 Frame = -3

Query: 1019 GGVDSMEICQKLRGDLQAVFNVLSKDMQQVMLSNPQRASLLQGSPEL 879
            GG DS    QKL+ DLQAVF+VL KDMQQ++L NPQRASLLQ   EL
Sbjct: 576  GGADSEGTFQKLKKDLQAVFSVLPKDMQQLLLLNPQRASLLQDPSEL 622

>gb|ZP_00109767.1| hypothetical protein [Nostoc punctiforme]
          Length = 577

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 15/37 (40%), Positives = 27/37 (72%)
 Frame = -3

Query: 977 DLQAVFNVLSKDMQQVMLSNPQRASLLQGSPELTKLP 867
           DLQ + ++L +D+QQV+ S+P+R SL++   +L + P
Sbjct: 6   DLQKLLDILPQDLQQVLESHPKRDSLVEVVLDLGRRP 42

>ref|XP_223715.1| similar to microtubule-associated protein EMAP [Rattus norvegicus]
          Length = 1382

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 14/49 (28%), Positives = 27/49 (54%)
 Frame = +2

Query: 365 IIFWD*ENSQKVTYIRGRRE*LV**FPMPYSFNPHHRDELRMLGIVNLE 511
           ++FWD +  +K+   RG ++ +          NPHH D+L  +GI +++
Sbjct: 651 VVFWDWKKGEKIATTRGHKDKI-----FVVKCNPHHADKLVTVGIKHIK 694

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 835,872,822
Number of Sequences: 1393205
Number of extensions: 17435849
Number of successful extensions: 37779
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37768
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 59877206459
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPDL003e04_f AV776676 1 172 2 MPDL035h05_f AV778271 19 570 3 GNf063e11 BP072057 21 150 4 GENLf064h02 BP065822 113 599 5 MFBL024b04_f BP042440 497 1028

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