Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001148A_C01 KMC001148A_c01
(617 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC22500.1| resistant specific protein-2 [Vigna radiata] 83 2e-32
gb|AAL76058.1|AF467554_1 seed coat BURP domain protein 1 [Glycin... 84 2e-28
ref|NP_197943.1| dehydration-induced protein RD22; protein id: A... 76 9e-27
dbj|BAA92225.1| similar to the BURP domain [Vigna unguiculata] 76 2e-26
gb|AAL26909.1|AF319165_1 dehydration-responsive protein RD22 [Pr... 78 1e-25
>dbj|BAC22500.1| resistant specific protein-2 [Vigna radiata]
Length = 440
Score = 83.2 bits (204), Expect(2) = 2e-32
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = -1
Query: 476 LRQLPVCHQDTSKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWLSK 336
++ + +CH+DTS+WDP++VAF+VLKVKPGT PVCHFFP GHLLW +K
Sbjct: 394 VKAIVICHKDTSQWDPDHVAFQVLKVKPGTSPVCHFFPNGHLLWYAK 440
Score = 77.8 bits (190), Expect(2) = 2e-32
Identities = 32/50 (64%), Positives = 43/50 (86%)
Frame = -3
Query: 615 DGVKKLADDHVIACHPLAYPYVVFGCHELPKTSAYFVPLEGEDGVRVKAV 466
DGVK LA++ +IACHP++YPYVVF CH++ ++A+ VPLEGEDG RVKA+
Sbjct: 348 DGVKILAEEEIIACHPMSYPYVVFYCHKMSNSTAHVVPLEGEDGTRVKAI 397
>gb|AAL76058.1|AF467554_1 seed coat BURP domain protein 1 [Glycine max]
gi|20086223|gb|AAM03361.1| seed coat BURP domain protein
1 [Glycine max]
Length = 305
Score = 84.0 bits (206), Expect(2) = 2e-28
Identities = 38/53 (71%), Positives = 46/53 (86%), Gaps = 1/53 (1%)
Frame = -3
Query: 615 DGVKKLADDHVIACHPLAYPYVVFGCHELPKTSAYFVPLEGEDGVRVKA-VAC 460
+GV+KL DD VIACHP++YPYVVFGCH +P++S Y V L+GEDGVRVKA VAC
Sbjct: 213 NGVRKLGDDKVIACHPMSYPYVVFGCHLVPRSSGYLVRLKGEDGVRVKAVVAC 265
Score = 63.9 bits (154), Expect(2) = 2e-28
Identities = 26/45 (57%), Positives = 34/45 (74%)
Frame = -1
Query: 476 LRQLPVCHQDTSKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWL 342
++ + CH+DTSKWD N+ AF+VL +KPG VCH F EG+LLWL
Sbjct: 259 VKAVVACHRDTSKWDHNHGAFKVLNLKPGNGTVCHVFTEGNLLWL 303
>ref|NP_197943.1| dehydration-induced protein RD22; protein id: At5g25610.1,
supported by cDNA: gi_16974545, supported by cDNA:
gi_19699080 [Arabidopsis thaliana]
gi|1172874|sp|Q08298|RD22_ARATH Dehydration-responsive
protein RD22 precursor gi|479589|pir||S34823
dehydration-induced protein RD22 - Arabidopsis thaliana
gi|391608|dbj|BAA01546.1| rd22 [Arabidopsis thaliana]
gi|16974546|gb|AAL31189.1| AT5g25610/T14C9_150
[Arabidopsis thaliana] gi|19699081|gb|AAL90908.1|
AT5g25610/T14C9_150 [Arabidopsis thaliana]
gi|447134|prf||1913421A rd22 gene
Length = 392
Score = 75.9 bits (185), Expect(2) = 9e-27
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = -1
Query: 473 RQLPVCHQDTSKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWLS 339
+ + VCH++TS W+PN++AF+VLKVKPGTVPVCHF PE H++W S
Sbjct: 347 KAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVWFS 391
Score = 66.2 bits (160), Expect(2) = 9e-27
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -3
Query: 612 GVKKLADDHVIACHPLAYPYVVFGCHELPKTSAYFVPLEGEDGVRVKAVA 463
GVKKL+DD + CH YP+ VF CH+ T+ Y VPLEGE+G+R KAVA
Sbjct: 301 GVKKLSDDKSVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVA 350
>dbj|BAA92225.1| similar to the BURP domain [Vigna unguiculata]
Length = 132
Score = 76.3 bits (186), Expect(2) = 2e-26
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = -1
Query: 476 LRQLPVCHQDTSKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWLSK 336
++ + VCH DTS+W+P ++AF VLKVKPGTVPVCHF PE H++W+ K
Sbjct: 86 VKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQK 132
Score = 65.1 bits (157), Expect(2) = 2e-26
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -3
Query: 612 GVKKLADDHVIACHPLAYPYVVFGCHELPKTSAYFVPLEGEDGVRVKAVA 463
GVKK++ D+ + CH +YPY VF CH+ T Y VPLEG +G+RVKAVA
Sbjct: 41 GVKKVSGDNAVVCHKQSYPYAVFYCHKTETTRTYPVPLEGANGIRVKAVA 90
>gb|AAL26909.1|AF319165_1 dehydration-responsive protein RD22 [Prunus persica]
Length = 349
Score = 78.2 bits (191), Expect(2) = 1e-25
Identities = 31/51 (60%), Positives = 42/51 (81%)
Frame = -1
Query: 479 ELRQLPVCHQDTSKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWLSK*ST 327
E + + VCH DTS+W+P ++AF+VLKVKPGTVPVCHF P+ H++W+ K ST
Sbjct: 299 EAKAVAVCHTDTSEWNPKHLAFQVLKVKPGTVPVCHFLPKDHIVWVPKKST 349
Score = 60.5 bits (145), Expect(2) = 1e-25
Identities = 28/50 (56%), Positives = 31/50 (62%)
Frame = -3
Query: 612 GVKKLADDHVIACHPLAYPYVVFGCHELPKTSAYFVPLEGEDGVRVKAVA 463
GVKKLA + CH YPY VF CH T AY VPL+G DG+ KAVA
Sbjct: 255 GVKKLAAGKSVVCHKQTYPYAVFYCHATKTTRAYVVPLKGADGLEAKAVA 304
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 563,314,065
Number of Sequences: 1393205
Number of extensions: 12673322
Number of successful extensions: 26640
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 25792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26637
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
