Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001143A_C02 KMC001143A_c02
(624 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D86318 protein F15H18.6 [imported] - Arabidopsis thaliana g... 133 2e-30
ref|NP_173281.1| unknown protein; protein id: At1g18460.1, suppo... 133 2e-30
dbj|BAB92384.1| P0516D04.2 [Oryza sativa (japonica cultivar-group)] 124 1e-27
gb|AAK96551.1| At1g73920/F2P9_21 [Arabidopsis thaliana] 118 5e-26
pir||G96766 protein lipase F2P9.21 [imported] - Arabidopsis thal... 118 5e-26
>pir||D86318 protein F15H18.6 [imported] - Arabidopsis thaliana
gi|6714304|gb|AAF26000.1|AC013354_19 F15H18.6
[Arabidopsis thaliana]
Length = 431
Score = 133 bits (335), Expect = 2e-30
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = -3
Query: 622 LIDIPVDLVAGQKDKVIRPSMVKRHYRLMKGGGVDVSYNEFEYAHLDFTFSHREELLSYV 443
LID+PVDLVAG+KDKVIRPSMV++HYR+M+ GVDVSYNEFEYAHLDFTFSHREELL+YV
Sbjct: 339 LIDVPVDLVAGKKDKVIRPSMVRKHYRVMRDSGVDVSYNEFEYAHLDFTFSHREELLAYV 398
Query: 442 MSRLLLVDPNPKHQVNQRDPKSKRK 368
MSRLLLV+P V+++ K K+K
Sbjct: 399 MSRLLLVEPTQTQTVHKKGMKLKKK 423
>ref|NP_173281.1| unknown protein; protein id: At1g18460.1, supported by cDNA:
gi_20856731 [Arabidopsis thaliana]
gi|20856732|gb|AAM26682.1| At1g18460/F15H18_15
[Arabidopsis thaliana] gi|24111439|gb|AAN46888.1|
At1g18460/F15H18_15 [Arabidopsis thaliana]
Length = 701
Score = 133 bits (335), Expect = 2e-30
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = -3
Query: 622 LIDIPVDLVAGQKDKVIRPSMVKRHYRLMKGGGVDVSYNEFEYAHLDFTFSHREELLSYV 443
LID+PVDLVAG+KDKVIRPSMV++HYR+M+ GVDVSYNEFEYAHLDFTFSHREELL+YV
Sbjct: 609 LIDVPVDLVAGKKDKVIRPSMVRKHYRVMRDSGVDVSYNEFEYAHLDFTFSHREELLAYV 668
Query: 442 MSRLLLVDPNPKHQVNQRDPKSKRK 368
MSRLLLV+P V+++ K K+K
Sbjct: 669 MSRLLLVEPTQTQTVHKKGMKLKKK 693
>dbj|BAB92384.1| P0516D04.2 [Oryza sativa (japonica cultivar-group)]
Length = 810
Score = 124 bits (311), Expect = 1e-27
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = -3
Query: 622 LIDIPVDLVAGQKDKVIRPSMVKRHYRLMKGGGVDVSYNEFEYAHLDFTFSHREELLSYV 443
LIDIPVDLVAGQ+D+VI PSMVK+HY+LM+ GV+VSYNEFEYAHLDFTFSHREELLSYV
Sbjct: 692 LIDIPVDLVAGQRDRVISPSMVKKHYKLMRKAGVEVSYNEFEYAHLDFTFSHREELLSYV 751
Query: 442 MSRLLLVDPNPKHQVNQRDPKSKR 371
MSRLLLV K ++ Q + ++
Sbjct: 752 MSRLLLVSDPGKGRIKQTSVRLRK 775
>gb|AAK96551.1| At1g73920/F2P9_21 [Arabidopsis thaliana]
Length = 416
Score = 118 bits (296), Expect = 5e-26
Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
Frame = -3
Query: 619 IDIPVDLVAGQKDKVIRPSMVKRHYRLMKGGGVDVSYNEFEYAHLDFTFSHREELLSYVM 440
ID+PVDLVAG+ DKVIR SMVK+HY +M+ VDVS+NEFEYAHLDFTFSHREELL YVM
Sbjct: 324 IDVPVDLVAGRNDKVIRSSMVKKHYNVMRDAEVDVSFNEFEYAHLDFTFSHREELLRYVM 383
Query: 439 SRLLLVDPNP--KHQVNQRDPKSKRKEQ 362
SRLLLV P + Q +Q+ K K+K++
Sbjct: 384 SRLLLVKQTPVQQRQTSQKGMKLKKKKK 411
>pir||G96766 protein lipase F2P9.21 [imported] - Arabidopsis thaliana
gi|12325144|gb|AAG52520.1|AC016662_14 putative lipase;
80914-78480 [Arabidopsis thaliana]
Length = 509
Score = 118 bits (296), Expect = 5e-26
Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
Frame = -3
Query: 619 IDIPVDLVAGQKDKVIRPSMVKRHYRLMKGGGVDVSYNEFEYAHLDFTFSHREELLSYVM 440
ID+PVDLVAG+ DKVIR SMVK+HY +M+ VDVS+NEFEYAHLDFTFSHREELL YVM
Sbjct: 417 IDVPVDLVAGRNDKVIRSSMVKKHYNVMRDAEVDVSFNEFEYAHLDFTFSHREELLRYVM 476
Query: 439 SRLLLVDPNP--KHQVNQRDPKSKRKEQ 362
SRLLLV P + Q +Q+ K K+K++
Sbjct: 477 SRLLLVKQTPVQQRQTSQKGMKLKKKKK 504
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 508,949,626
Number of Sequences: 1393205
Number of extensions: 10348163
Number of successful extensions: 21035
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21021
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25301904073
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
