Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001140A_C01 KMC001140A_c01
(772 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO33579.1|AF478454_1 putative beta-amyrin synthase [Lotus ja... 260 2e-68
emb|CAD23247.1| beta-amyrin synthase [Medicago truncatula] 250 1e-65
gb|AAO33578.1|AF478453_1 beta-amyrin synthase [Medicago truncatula] 250 1e-65
dbj|BAA89815.1| beta-amyrin synthase [Glycyrrhiza glabra] 247 2e-64
gb|AAM23264.1| beta-amyrin synthase [Glycine max] 246 3e-64
>gb|AAO33579.1|AF478454_1 putative beta-amyrin synthase [Lotus japonicus]
Length = 750
Score = 260 bits (664), Expect = 2e-68
Identities = 123/123 (100%), Positives = 123/123 (100%)
Frame = -3
Query: 770 IRKAVKFLLTTQRGDGGWGESYLSSPKKIYVPFEGNRSNVVHTAWALMGLIHSGQAERDP 591
IRKAVKFLLTTQRGDGGWGESYLSSPKKIYVPFEGNRSNVVHTAWALMGLIHSGQAERDP
Sbjct: 628 IRKAVKFLLTTQRGDGGWGESYLSSPKKIYVPFEGNRSNVVHTAWALMGLIHSGQAERDP 687
Query: 590 TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 411
TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS
Sbjct: 688 TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 747
Query: 410 TAV 402
TAV
Sbjct: 748 TAV 750
>emb|CAD23247.1| beta-amyrin synthase [Medicago truncatula]
Length = 762
Score = 250 bits (639), Expect = 1e-65
Identities = 118/123 (95%), Positives = 121/123 (97%)
Frame = -3
Query: 770 IRKAVKFLLTTQRGDGGWGESYLSSPKKIYVPFEGNRSNVVHTAWALMGLIHSGQAERDP 591
IRKAVKFLLTTQR DGGWGESYLSSPKKIYVP EG+RSNVVHTAWALMGLIH+GQAERDP
Sbjct: 640 IRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQAERDP 699
Query: 590 TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 411
TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYP+WALAEYRRRVPLPS
Sbjct: 700 TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPLWALAEYRRRVPLPS 759
Query: 410 TAV 402
TAV
Sbjct: 760 TAV 762
>gb|AAO33578.1|AF478453_1 beta-amyrin synthase [Medicago truncatula]
Length = 762
Score = 250 bits (639), Expect = 1e-65
Identities = 118/123 (95%), Positives = 121/123 (97%)
Frame = -3
Query: 770 IRKAVKFLLTTQRGDGGWGESYLSSPKKIYVPFEGNRSNVVHTAWALMGLIHSGQAERDP 591
IRKAVKFLLTTQR DGGWGESYLSSPKKIYVP EG+RSNVVHTAWALMGLIH+GQAERDP
Sbjct: 640 IRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQAERDP 699
Query: 590 TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 411
TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYP+WALAEYRRRVPLPS
Sbjct: 700 TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPLWALAEYRRRVPLPS 759
Query: 410 TAV 402
TAV
Sbjct: 760 TAV 762
>dbj|BAA89815.1| beta-amyrin synthase [Glycyrrhiza glabra]
Length = 765
Score = 247 bits (630), Expect = 2e-64
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -3
Query: 770 IRKAVKFLLTTQRGDGGWGESYLSSPKKIYVPFEGNRSNVVHTAWALMGLIHSGQAERDP 591
IRKAVKFLLTTQR DGGWGESYLSSPKKIYVP EG+RSNVVHTAWALMGLIH+GQAERDP
Sbjct: 640 IRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQAERDP 699
Query: 590 TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 411
PLHRAAKL+INSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS
Sbjct: 700 APLHRAAKLIINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 759
Query: 410 TAV 402
T V
Sbjct: 760 TPV 762
>gb|AAM23264.1| beta-amyrin synthase [Glycine max]
Length = 739
Score = 246 bits (628), Expect = 3e-64
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -3
Query: 770 IRKAVKFLLTTQRGDGGWGESYLSSPKKIYVPFEGNRSNVVHTAWALMGLIHSGQAERDP 591
IRKAVKFLLTTQR DGGWGESYLSSPKKIYVP EG+RSNVVHTAWALMGLIH+GQA+RDP
Sbjct: 617 IRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQADRDP 676
Query: 590 TPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 411
PLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS
Sbjct: 677 MPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 736
Query: 410 TAV 402
T V
Sbjct: 737 TEV 739
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 695,771,371
Number of Sequences: 1393205
Number of extensions: 16012508
Number of successful extensions: 36188
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 34756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36050
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37815044670
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
