Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001138A_C01 KMC001138A_c01
(517 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190079.1| putative protein; protein id: At3g44930.1 [Arab... 35 0.66
gb|AAM52320.1|AC105363_9 Putative peroxidase [Oryza sativa (japo... 34 1.1
gb|AAM88383.1|AF525425_1 peroxidase 1 [Triticum aestivum] gi|289... 33 1.9
dbj|BAB63629.1| putative peroxidase [Oryza sativa (japonica cult... 33 1.9
pir||S22505 peroxidase (EC 1.11.1.7) BP1 precursor - barley gi|1... 33 1.9
>ref|NP_190079.1| putative protein; protein id: At3g44930.1 [Arabidopsis thaliana]
gi|11357699|pir||T51790 hypothetical protein F28D10_120
- Arabidopsis thaliana gi|9798396|emb|CAC03543.1|
putative protein [Arabidopsis thaliana]
Length = 731
Score = 34.7 bits (78), Expect = 0.66
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = +3
Query: 174 LSITFILKQ--------YRILVSET*IIKYAYTIPILWSLLSQGVVMCFPRRHFIVKQQK 329
L+++FIL Y ++ +T I + Y+ IL+SLL+ G+V RR + +++
Sbjct: 337 LAVSFILSYKSFADFVLYEAVLDDTYISQATYSFLILYSLLNAGIVPTVLRRMYDPRRKY 396
Query: 330 ISYLKNDL 353
++Y K D+
Sbjct: 397 VNYQKRDI 404
>gb|AAM52320.1|AC105363_9 Putative peroxidase [Oryza sativa (japonica cultivar-group)]
Length = 319
Score = 33.9 bits (76), Expect = 1.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 82 Y*DIGIVVGLVRMHFHDCLL 23
Y +IG GLVRMHFHDC +
Sbjct: 40 YTNIGFAAGLVRMHFHDCFV 59
>gb|AAM88383.1|AF525425_1 peroxidase 1 [Triticum aestivum] gi|28916432|gb|AAO59389.1|
peroxidase precursor [Aegilops tauschii subsp.
strangulata]
Length = 358
Score = 33.1 bits (74), Expect = 1.9
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 76 DIGIVVGLVRMHFHDCLL 23
DIG+ GL+R+HFHDC +
Sbjct: 62 DIGLAAGLLRLHFHDCFV 79
>dbj|BAB63629.1| putative peroxidase [Oryza sativa (japonica cultivar-group)]
Length = 358
Score = 33.1 bits (74), Expect = 1.9
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 76 DIGIVVGLVRMHFHDCLL 23
DIG+ GL+R+HFHDC +
Sbjct: 67 DIGLAAGLLRLHFHDCFV 84
>pir||S22505 peroxidase (EC 1.11.1.7) BP1 precursor - barley
gi|167081|gb|AAA32973.1| peroxidase BP 1
Length = 359
Score = 33.1 bits (74), Expect = 1.9
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 76 DIGIVVGLVRMHFHDCLL 23
DIG+ GL+R+HFHDC +
Sbjct: 64 DIGLAAGLLRLHFHDCFV 81
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 389,526,597
Number of Sequences: 1393205
Number of extensions: 7313624
Number of successful extensions: 14039
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 13678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14032
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
