Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001137A_C01 KMC001137A_c01
(594 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G86232 cysteine proteinase (EC 3.4.22.-) [similarity] - Ara... 46 3e-04
emb|CAB38315.1| chymopapain isoform III [Carica papaya] 46 3e-04
ref|NP_563855.1| cysteine protease XBCP3; protein id: At1g09850.... 46 3e-04
gb|AAK71314.1|AF388175_1 papain-like cysteine peptidase XBCP3 [A... 46 3e-04
emb|CAB38314.1| chymopapain isoform II [Carica papaya] 46 3e-04
>pir||G86232 cysteine proteinase (EC 3.4.22.-) [similarity] - Arabidopsis
thaliana gi|2160175|gb|AAB60738.1| Strong similarity to
Dianthus cysteine proteinase (gb|U17135). [Arabidopsis
thaliana]
Length = 416
Score = 46.2 bits (108), Expect = 3e-04
Identities = 26/67 (38%), Positives = 37/67 (54%)
Frame = -1
Query: 519 SETEARELFEIWCKQYHKTYPSEEEKLYRFGVFKKTHALCVRENQKHADPLYRSLGTHGF 340
S + ELF+ WC+++ KTY SEEE+ R +FK H V ++ + Y SL + F
Sbjct: 22 SSDDISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDF-VTQHNLITNATY-SLSLNAF 79
Query: 339 GDLTMDE 319
DLT E
Sbjct: 80 ADLTHHE 86
>emb|CAB38315.1| chymopapain isoform III [Carica papaya]
Length = 361
Score = 46.2 bits (108), Expect = 3e-04
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = -1
Query: 501 ELFEIWCKQYHKTYPSEEEKLYRFGVFKKTHALCVRENQKHADPLYRSLGTHGFGDLTMD 322
+LF+ W +++K Y S +EK+YRF +F + + + + E K + + LG +GF DL+ D
Sbjct: 46 QLFDSWMLKHNKIYESIDEKIYRFEIF-RDNLMYIDETNKKNNSYW--LGLNGFADLSND 102
Query: 321 E---KMEVFGAGPWKPLEHY 271
E K F A + LEH+
Sbjct: 103 EFKKKYVGFVAEDFTGLEHF 122
>ref|NP_563855.1| cysteine protease XBCP3; protein id: At1g09850.1, supported by
cDNA: gi_14600256 [Arabidopsis thaliana]
Length = 437
Score = 46.2 bits (108), Expect = 3e-04
Identities = 26/67 (38%), Positives = 37/67 (54%)
Frame = -1
Query: 519 SETEARELFEIWCKQYHKTYPSEEEKLYRFGVFKKTHALCVRENQKHADPLYRSLGTHGF 340
S + ELF+ WC+++ KTY SEEE+ R +FK H V ++ + Y SL + F
Sbjct: 24 SSDDISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDF-VTQHNLITNATY-SLSLNAF 81
Query: 339 GDLTMDE 319
DLT E
Sbjct: 82 ADLTHHE 88
>gb|AAK71314.1|AF388175_1 papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana]
Length = 437
Score = 46.2 bits (108), Expect = 3e-04
Identities = 26/67 (38%), Positives = 37/67 (54%)
Frame = -1
Query: 519 SETEARELFEIWCKQYHKTYPSEEEKLYRFGVFKKTHALCVRENQKHADPLYRSLGTHGF 340
S + ELF+ WC+++ KTY SEEE+ R +FK H V ++ + Y SL + F
Sbjct: 24 SSDDISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDF-VTQHNLITNATY-SLSLNAF 81
Query: 339 GDLTMDE 319
DLT E
Sbjct: 82 ADLTHHE 88
>emb|CAB38314.1| chymopapain isoform II [Carica papaya]
Length = 352
Score = 46.2 bits (108), Expect = 3e-04
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = -1
Query: 501 ELFEIWCKQYHKTYPSEEEKLYRFGVFKKTHALCVRENQKHADPLYRSLGTHGFGDLTMD 322
+LF+ W +++K Y S +EK+YRF +F + + + + E K + + LG +GF DL+ D
Sbjct: 46 QLFDSWMLKHNKIYESIDEKIYRFEIF-RDNLMYIDETNKKNNSYW--LGLNGFADLSND 102
Query: 321 E---KMEVFGAGPWKPLEHY 271
E K F A + LEH+
Sbjct: 103 EFKKKYVGFVAEDFTGLEHF 122
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 537,186,840
Number of Sequences: 1393205
Number of extensions: 11972303
Number of successful extensions: 29198
Number of sequences better than 10.0: 153
Number of HSP's better than 10.0 without gapping: 28429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29188
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
