Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001135A_C01 KMC001135A_c01
(682 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180167.1| KH domain protein; protein id: At2g25970.1, sup... 98 1e-19
ref|NP_493462.1| Human TFG related TFG-1 (49.7 kD) (tfg-1) [Caen... 77 3e-13
sp|Q92125|ANX7_XENLA Annexin A7 (Annexin VII) (Synexin) gi|21340... 75 6e-13
gb|EAA42167.1| GLP_480_68667_67975 [Giardia lamblia ATCC 50803] 75 1e-12
ref|NP_648389.2| CG32056-PA [Drosophila melanogaster] gi|2309373... 74 1e-12
>ref|NP_180167.1| KH domain protein; protein id: At2g25970.1, supported by cDNA:
gi_19310434 [Arabidopsis thaliana]
gi|7487198|pir||T02627 hypothetical protein At2g25960
[imported] - Arabidopsis thaliana
gi|19310435|gb|AAL84954.1| F17H15.1/F17H15.1
[Arabidopsis thaliana] gi|20197266|gb|AAM15002.1|
unknown protein [Arabidopsis thaliana]
gi|20197368|gb|AAM15045.1| unknown protein [Arabidopsis
thaliana]
Length = 632
Score = 97.8 bits (242), Expect = 1e-19
Identities = 67/158 (42%), Positives = 76/158 (47%), Gaps = 4/158 (2%)
Frame = -2
Query: 663 PPQGAP-QSGYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQS-QSPNTT 490
P QG+ Q+GYG PPTSQA Y + P + Y +GYG P P+ PP YGQS QSP
Sbjct: 496 PAQGSTGQAGYGAPPTSQAGYSSQP--AAAYNSGYGAP---PPASKPPTYGQSQQSPGAP 550
Query: 489 GGYGQTGGYPPSHPPYGGAVQPGYGAPPYGAPGGQSGYAQAPPTYGSSAYGAGYPPPSAY 310
G YG G Y GYG PP GY QAP YGS YG GY P+A
Sbjct: 551 GSYGSQSG-------YAQPAASGYGQPP------AYGYGQAPQGYGS--YG-GYTQPAAG 594
Query: 309 SGDGNAGEGGNTRGSNDGAPA--QAVQQGSVAKSSPPS 202
G + G G T G G PA A K+SP S
Sbjct: 595 GGYSSDGSAGATAGGGGGTPASQSAAPPAGPPKASPKS 632
Score = 59.7 bits (143), Expect = 4e-08
Identities = 58/174 (33%), Positives = 65/174 (37%), Gaps = 28/174 (16%)
Frame = -2
Query: 666 YPPQGAPQSGYGVPPTSQAAYGNPPQVQSGYGAGY-------GPPQ-AQKPSGTPP---- 523
YP QG Q+ PP+S A G PP Q GYG GY GPPQ Q P G+ P
Sbjct: 316 YPQQGGYQAR---PPSSWAPPGGPP-AQPGYG-GYMQPGAYPGPPQYGQSPYGSYPQQTS 370
Query: 522 --VYGQSQSP----NTTGGYGQTGGYPPSHPPYGGAVQPGYGAPPYGAPGGQSGYAQAPP 361
Y QS P + G Y G P GG+ P Y SGY QA
Sbjct: 371 AGYYDQSSVPPSQQSAQGEYDYYGQQQSQQPSSGGSSAPPTDTTGYNYYQHASGYGQAGQ 430
Query: 360 TYGSSAYGA-------GYPPPSAYSGDGNAGEGGNTRGSND---GAPAQAVQQG 229
Y YGA GY + Y G G N D AP + Q G
Sbjct: 431 GYQQDGYGAYNASQQSGYGQAAGYDQQGGYGSTTNPSQEEDASQAAPPSSAQSG 484
Score = 52.4 bits (124), Expect = 6e-06
Identities = 46/126 (36%), Positives = 54/126 (42%), Gaps = 19/126 (15%)
Frame = -2
Query: 522 VYGQSQSPNTT--GGYGQTGGY---PPSH--PPYGGAVQPGYGAPPYGAPGGQSGYAQAP 364
+ G+++ N+ GGY Q GGY PPS PP G QPGYG Y PG G P
Sbjct: 301 ISGENRMRNSAMGGGYPQQGGYQARPPSSWAPPGGPPAQPGYGG--YMQPGAYPG----P 354
Query: 363 PTYGSSAYG-------AGY-----PPPSAYSGDGNAGEGGNTRGSNDGAPAQAVQQGSVA 220
P YG S YG AGY PPS S G G Q+ Q S
Sbjct: 355 PQYGQSPYGSYPQQTSAGYYDQSSVPPSQQSAQGEYDYYGQ---------QQSQQPSSGG 405
Query: 219 KSSPPS 202
S+PP+
Sbjct: 406 SSAPPT 411
Score = 47.4 bits (111), Expect = 2e-04
Identities = 43/127 (33%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Frame = -2
Query: 681 PNAANYPPQGAPQSGYGVPPT--SQAAYGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQS 508
P A+ P G Q G P + SQ+ Y P SGY G PP YG
Sbjct: 532 PPASKPPTYGQSQQSPGAPGSYGSQSGYAQP--AASGY-------------GQPPAYGYG 576
Query: 507 QSPNTTGGYGQTGGYPPSHPPYGGAVQPGYGAPPYGAPGGQSGYAQAPPTYGSSAYGAGY 328
Q+P GYG GGY + P GG GY + G+ G +G P S+A AG
Sbjct: 577 QAPQ---GYGSYGGY--TQPAAGG----GYSSD--GSAGATAGGGGGTPASQSAAPPAGP 625
Query: 327 PPPSAYS 307
P S S
Sbjct: 626 PKASPKS 632
>ref|NP_493462.1| Human TFG related TFG-1 (49.7 kD) (tfg-1) [Caenorhabditis elegans]
gi|6580329|emb|CAB63398.1| C. elegans TFG-1 protein
(corresponding sequence Y63D3A.5) [Caenorhabditis
elegans]
Length = 486
Score = 76.6 bits (187), Expect = 3e-13
Identities = 55/159 (34%), Positives = 61/159 (37%), Gaps = 30/159 (18%)
Frame = -2
Query: 663 PPQGAPQSGYGVPP------------------------TSQAAYGNPPQVQSGYGAGYGP 556
PPQGAPQ G+G PP + Q+ G PP V S G P
Sbjct: 322 PPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPP 381
Query: 555 PQAQKPSG---TPPVYGQSQSPNTTGGYGQTGGYPPSHPPYGGAVQPGYGAPPYGAPGGQ 385
PQ+ P P +G Q P GGYG PP GG PG PP G PGG
Sbjct: 382 PQSGPPGAFAPPPSAFGAPQGPGGPGGYGP--------PPPGGPGAPGSYGPPQGGPGGF 433
Query: 384 SGYAQAPPTYGSSAYG---AGYPPPSAYSGDGNAGEGGN 277
PP G AYG G+PP A GGN
Sbjct: 434 G----PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGN 468
Score = 64.3 bits (155), Expect = 1e-09
Identities = 60/167 (35%), Positives = 66/167 (38%), Gaps = 18/167 (10%)
Frame = -2
Query: 651 APQSGYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQK-PSGTPPVYGQSQSPNTTGGYGQ 475
AP +G PP S PP S YG GY PPQ Q+ G PP G Q Q
Sbjct: 288 APPQQFGGPPPS-----GPP---SEYG-GYAPPQQQQQQFGAPPPQGAPQ---------Q 329
Query: 474 TGGYPPSHPPYGGAVQPGYGAPP---YGAPGGQSGYAQAPPTYG----------SSAYGA 334
G PP PP GG Q +GAPP + AP QS PP S GA
Sbjct: 330 GFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGA 389
Query: 333 GYPPPSAY---SGDGNAGEGGNTRGSNDGAP-AQAVQQGSVAKSSPP 205
PPPSA+ G G G G GAP + QG PP
Sbjct: 390 FAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP 436
Score = 54.7 bits (130), Expect = 1e-06
Identities = 42/109 (38%), Positives = 48/109 (43%), Gaps = 5/109 (4%)
Frame = -2
Query: 663 PPQGAPQSGYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQSQSPNTTGG 484
PPQ P + PP++ A PQ G G GYGPP P G P YG Q GG
Sbjct: 381 PPQSGPPGAFAPPPSAFGA----PQGPGGPG-GYGPPPPGGP-GAPGSYGPPQ-----GG 429
Query: 483 YGQTGGYPPSHPPYGGAVQPGY---GAPPYGAPGGQSG--YAQAPPTYG 352
G G PP P G G+ GAPP GA G G +A+ P G
Sbjct: 430 PGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARGPSATG 478
Score = 37.0 bits (84), Expect = 0.25
Identities = 30/95 (31%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Frame = -2
Query: 681 PNAANYPPQGAPQS--GYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQS 508
P PP G P + YG P +G PP G GA PP P G PP
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP--GGPGAYGPPPTGFPPVGAPP----- 458
Query: 507 QSPNTTGGYGQTGGYPPSHPPYGGAVQPGYGAPPY 403
G G GG P + P GY PY
Sbjct: 459 -----PGAAGAPGGNPFARGPSA----TGYRQSPY 484
Score = 32.0 bits (71), Expect = 8.1
Identities = 39/104 (37%), Positives = 43/104 (40%), Gaps = 8/104 (7%)
Frame = +2
Query: 254 APSLLPRVF--PPSPALPSP-EYAEG--GG*PAP*ALLPYVGGA*A*PD*PPG---APYG 409
APS P+ F PP P +P +A G P A P GA P P G P G
Sbjct: 358 APS--PQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPG 415
Query: 410 GAPYPGCTAPP*GGWEGGYPPV*P*PPVVLGDCDCPYTGGVPLG 541
G PG PP GG G PP PP G P TG P+G
Sbjct: 416 GPGAPGSYGPPQGGPGGFGPP----PPGGPGAYGPPPTGFPPVG 455
>sp|Q92125|ANX7_XENLA Annexin A7 (Annexin VII) (Synexin) gi|2134038|pir||S70644 annexin
VII - African clawed frog gi|790544|gb|AAB18145.1|
annexin VII [Xenopus laevis]
Length = 512
Score = 75.5 bits (184), Expect = 6e-13
Identities = 57/157 (36%), Positives = 66/157 (41%), Gaps = 4/157 (2%)
Frame = -2
Query: 660 PQGAPQSGYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQSQSPNTTGGY 481
P G P GY P +Y PP Q + G PP A PP G +P GGY
Sbjct: 6 PSGFP--GYPGYPGGDPSY--PPAAQQAFPGGQFPPAAGG-GAFPPASGGGNAPPPGGGY 60
Query: 480 GQTGGYPPSHPPYGGAVQPGY-GAPPYGAPGGQSGYAQAP--PTYGSSAYGA-GYPPPSA 313
GGYP GG P Y GAP +GAP G GY P P YG YG G+ P+
Sbjct: 61 PHAGGYPAPGGYPGG--MPSYPGAPGFGAPAGGQGYGAPPGAPAYGVPGYGGPGFNAPAG 118
Query: 312 YSGDGNAGEGGNTRGSNDGAPAQAVQQGSVAKSSPPS 202
G NAG G G+P A G ++ S S
Sbjct: 119 GYGAPNAGGFGVPPAGGYGSPGGAPGYGGFSQPSSQS 155
Score = 53.5 bits (127), Expect = 3e-06
Identities = 53/151 (35%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Frame = -2
Query: 681 PNAANYP-----PQGAPQ----SGYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQKPSGT 529
P+A YP P G P G+G P Q YG PP + GYG P P+G
Sbjct: 61 PHAGGYPAPGGYPGGMPSYPGAPGFGAPAGGQG-YGAPPGAPAYGVPGYGGPGFNAPAGG 119
Query: 528 PPVYGQSQSPNTTGGYG--QTGGY--PPSHPPYGGAVQPGYGAPPYGAPGGQSGYAQAP- 364
YG +PN GG+G GGY P P YGG QP + G PG G Q P
Sbjct: 120 ---YG---APNA-GGFGVPPAGGYGSPGGAPGYGGFSQPSSQSYGAGGPGQMPG--QMPG 170
Query: 363 --PTYGSSAYGAGYPP--PSAYSGDGNAGEG 283
P S Y +G P P+ Y+ A +G
Sbjct: 171 QMPGQAPSGYPSGPAPAQPTPYAAAMTATQG 201
Score = 49.7 bits (117), Expect = 4e-05
Identities = 36/108 (33%), Positives = 39/108 (35%), Gaps = 8/108 (7%)
Frame = -2
Query: 507 QSPNTTGGYGQTGGYPPSHPPYGGAVQPGYGAPPYGAPGG---QSGYAQAPPTYGSSAYG 337
Q P+ GY G PS+PP PG PP G SG APP G +
Sbjct: 4 QYPSGFPGYPGYPGGDPSYPPAAQQAFPGGQFPPAAGGGAFPPASGGGNAPPPGGGYPHA 63
Query: 336 AGYPPPSAYSG-----DGNAGEGGNTRGSNDGAPAQAVQQGSVAKSSP 208
GYP P Y G G G G G GAP A G P
Sbjct: 64 GGYPAPGGYPGGMPSYPGAPGFGAPAGGQGYGAPPGAPAYGVPGYGGP 111
Score = 48.1 bits (113), Expect = 1e-04
Identities = 39/122 (31%), Positives = 45/122 (35%), Gaps = 3/122 (2%)
Frame = -2
Query: 681 PNAANYPPQGAPQSGYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQSQS 502
P YP G + G P + G P G GYG P G P
Sbjct: 55 PPGGGYPHAGGYPAPGGYPGGMPSYPGAPGFGAPAGGQGYGAPPGAPAYGVP-------- 106
Query: 501 PNTTGGYGQTGGYPPSHPPYGGAVQPGYGAPP---YGAPGGQSGYAQAPPTYGSSAYGAG 331
GYG G P+ YG G+G PP YG+PGG GY S +YGAG
Sbjct: 107 -----GYGGPGFNAPA-GGYGAPNAGGFGVPPAGGYGSPGGAPGYGGFSQP-SSQSYGAG 159
Query: 330 YP 325
P
Sbjct: 160 GP 161
Score = 33.5 bits (75), Expect = 2.8
Identities = 44/136 (32%), Positives = 47/136 (34%), Gaps = 4/136 (2%)
Frame = +2
Query: 269 PRVFPPSPALPS--PEYAEGGG*PAP*ALLPYVGGA*A*PD*PPGAPYGGAPYPGCTAPP 442
P FP P P P Y P P G A P P + G AP PG P
Sbjct: 6 PSGFPGYPGYPGGDPSYPPAAQQAFPGGQFPPAAGGGAFP---PASGGGNAPPPGGGYPH 62
Query: 443 *GGW--EGGYPPV*P*PPVVLGDCDCPYTGGVPLGF*A*GGPYPAP*PDCT*GGLP*AAW 616
GG+ GGYP P Y G G A G Y AP G P A+
Sbjct: 63 AGGYPAPGGYPGGMP-----------SYPGAPGFGAPAGGQGYGAP------PGAP--AY 103
Query: 617 EVGGTP*PD*GAPCGG 664
V G P AP GG
Sbjct: 104 GVPGYGGPGFNAPAGG 119
>gb|EAA42167.1| GLP_480_68667_67975 [Giardia lamblia ATCC 50803]
Length = 230
Score = 74.7 bits (182), Expect = 1e-12
Identities = 61/146 (41%), Positives = 63/146 (42%), Gaps = 17/146 (11%)
Frame = -2
Query: 654 GAPQSGYGVPPTSQAAYGNPPQVQS-GYGA---GYGPP------QAQKPSGTPPV--YGQ 511
GAPQ GYG P S YG P Q Q GYGA GYG P AQ+P G P YG
Sbjct: 16 GAPQ-GYGAPAQS---YGAPQQPQQPGYGASAPGYGAPVQSYGAPAQQPYGAPQQQQYG- 70
Query: 510 SQSPNTTGGYGQTGGYPPSHPPYGGAV---QPGYGAPPYGAP--GGQSGYAQAPPTYGSS 346
Q P GYGQ Y S YGG V Q YG P GAP GG YG
Sbjct: 71 GQQPQAQMGYGQPSPYGASQSSYGGGVGQGQQSYGMPQAGAPSYGGMVQPGMPSGGYGQP 130
Query: 345 AYGAGYPPPSAYSGDGNAGEGGNTRG 268
G G P Y G G GG+ G
Sbjct: 131 QMGYGAPQQPMYGGGAMPGFGGSFSG 156
Score = 43.1 bits (100), Expect = 0.003
Identities = 42/122 (34%), Positives = 48/122 (38%), Gaps = 16/122 (13%)
Frame = -2
Query: 519 YGQSQSPNTTGGYGQTGGYPPSHPPYG----------GAVQPGYGAP--PYGAPGGQSGY 376
YGQ S + YG GY YG GA PGYGAP YGAP Q
Sbjct: 5 YGQPASQPSL--YGAPQGYGAPAQSYGAPQQPQQPGYGASAPGYGAPVQSYGAPAQQPYG 62
Query: 375 AQAPPTYGSSAYGA--GYPPPSAYSGDGNAGEGGNTRGSND-GAP-AQAVQQGSVAKSSP 208
A YG A GY PS Y ++ GG +G G P A A G + +
Sbjct: 63 APQQQQYGGQQPQAQMGYGQPSPYGASQSSYGGGVGQGQQSYGMPQAGAPSYGGMVQPGM 122
Query: 207 PS 202
PS
Sbjct: 123 PS 124
Score = 39.3 bits (90), Expect = 0.051
Identities = 41/143 (28%), Positives = 52/143 (35%), Gaps = 6/143 (4%)
Frame = -2
Query: 654 GAPQSGYGVPPTSQAAYGNPPQVQSGY-GAGYGPPQAQKPSGTPPVYGQSQSPNTTGGY- 481
G Q YG+P +YG VQ G GYG PQ + P+YG P G +
Sbjct: 98 GQGQQSYGMPQAGAPSYGG--MVQPGMPSGGYGQPQMGYGAPQQPMYGGGAMPGFGGSFS 155
Query: 480 GQTGGYPPSHP--PYGGAVQP--GYGAPPYGAPGGQSGYAQAPPTYGSSAYGAGYPPPSA 313
G P S+P P G +P G G P G + + AG P S
Sbjct: 156 GPMPFMPQSYPGMPVVGQYKPVTGGGIPFMGK---------------TESKEAGNEPEST 200
Query: 312 YSGDGNAGEGGNTRGSNDGAPAQ 244
N E + GAPA+
Sbjct: 201 SKDLANPSEPAAPAIVSSGAPAE 223
Score = 35.8 bits (81), Expect = 0.56
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = -2
Query: 408 PYGAPGGQSGYAQAPPTYGSSAYGAGYPPPSAYSGDGNAGEGGNTRGSNDGAPAQ 244
PYG P Q AP YG+ A G P G G + G + GAPAQ
Sbjct: 4 PYGQPASQPSLYGAPQGYGAPAQSYGAPQQPQQPGYGASAPGYGAPVQSYGAPAQ 58
>ref|NP_648389.2| CG32056-PA [Drosophila melanogaster] gi|23093731|gb|AAF50165.2|
CG32056-PA [Drosophila melanogaster]
Length = 415
Score = 74.3 bits (181), Expect = 1e-12
Identities = 60/157 (38%), Positives = 63/157 (39%), Gaps = 20/157 (12%)
Frame = -2
Query: 645 QSGYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQSQSPNTTGGYG---- 478
Q GY P N P + G GY PP + PP G Q P T YG
Sbjct: 7 QGGYAPPGFGSGFQPNAPPAE---GFGYPPPTGGHNAPYPPAPGHPQPPPPTN-YGFMPG 62
Query: 477 -QTGGYPP--SHPPYG-----GAVQPGY-----GAPPY-GAPGGQSGYAQAPPTYGSSAY 340
Q GY P PPYG GA QP Y G PPY G PGGQ Y P G Y
Sbjct: 63 PQPAGYAPVPQMPPYGEAPPYGAGQPPYMGGPGGQPPYAGGPGGQPPYVGGPG--GQPHY 120
Query: 339 GAGYPPPSAYSG--DGNAGEGGNTRGSNDGAPAQAVQ 235
G G PPP A+ G G AG GG P Q Q
Sbjct: 121 GGGAPPPQAFGGYPPGPAGPGGPPNAFGGYPPGQPQQ 157
Score = 52.0 bits (123), Expect = 8e-06
Identities = 40/127 (31%), Positives = 44/127 (34%), Gaps = 15/127 (11%)
Frame = -2
Query: 663 PPQG-APQSGYGVPPTSQAAYGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQSQSPNTTG 487
PP G AP G G PP G PP G G PP P G P G + P G
Sbjct: 75 PPYGEAPPYGAGQPPYMGGPGGQPPYAG---GPGGQPPYVGGPGGQPHYGGGAPPPQAFG 131
Query: 486 GY-----------GQTGGYPPSHPPYGGAVQPGYG---APPYGAPGGQSGYAQAPPTYGS 349
GY GGYPP P QPG G P GG + + P +
Sbjct: 132 GYPPGPAGPGGPPNAFGGYPPGQPQQPIVTQPGMGPGMGPGMAPQGGPADWMSIPTGIPN 191
Query: 348 SAYGAGY 328
G Y
Sbjct: 192 CPRGLEY 198
Score = 48.5 bits (114), Expect = 8e-05
Identities = 42/136 (30%), Positives = 49/136 (35%), Gaps = 25/136 (18%)
Frame = -2
Query: 528 PPVYGQSQSPNT--TGGYGQ---TGGYPPSHPPYGGAVQP----GYGAPPYGAPGGQSGY 376
PP +G PN G+G TGG+ +PP G QP YG P P G +
Sbjct: 12 PPGFGSGFQPNAPPAEGFGYPPPTGGHNAPYPPAPGHPQPPPPTNYGFMPGPQPAGYAPV 71
Query: 375 AQAPPTYGSSAYGAGYPP--------PSAYSGDGN-----AGEGGNTRGSNDGAPAQA-- 241
Q PP + YGAG PP P G G G GG P QA
Sbjct: 72 PQMPPYGEAPPYGAGQPPYMGGPGGQPPYAGGPGGQPPYVGGPGGQPHYGGGAPPPQAFG 131
Query: 240 -VQQGSVAKSSPPS*F 196
G PP+ F
Sbjct: 132 GYPPGPAGPGGPPNAF 147
Score = 47.4 bits (111), Expect = 2e-04
Identities = 45/125 (36%), Positives = 48/125 (38%), Gaps = 12/125 (9%)
Frame = -2
Query: 660 PQGAPQSGYGVPPTSQAA----------YGNPPQVQSGYGAGYGPPQAQKPSGTPPVYGQ 511
PQ P + YG P Q A YG P YGAG PP P G PP G
Sbjct: 49 PQPPPPTNYGFMPGPQPAGYAPVPQMPPYGEAPP----YGAGQ-PPYMGGPGGQPPYAG- 102
Query: 510 SQSPNTTGGYGQTGGYPPSHPPYGGAVQPGYGAPPYGAPGGQSGYAQAPPTYGS--SAYG 337
GG G P P YGG GAPP P GY P G +A+G
Sbjct: 103 -----GPGGQPPYVGGPGGQPHYGG------GAPP---PQAFGGYPPGPAGPGGPPNAFG 148
Query: 336 AGYPP 322
GYPP
Sbjct: 149 -GYPP 152
Score = 35.0 bits (79), Expect = 0.95
Identities = 43/131 (32%), Positives = 45/131 (33%), Gaps = 3/131 (2%)
Frame = +2
Query: 278 FPPSPALPSPEYAEGGG*---PAP*ALLPYVGGA*A*PD*PPGAPYGGAPYPGCTAPP*G 448
+PP+P P P G P P P P PYG AP G PP
Sbjct: 42 YPPAPGHPQPPPPTNYGFMPGPQPAGYAPV----------PQMPPYGEAPPYGAGQPPYM 91
Query: 449 GWEGGYPPV*P*PPVVLGDCDCPYTGGVPLGF*A*GGPYPAP*PDCT*GGLP*AAWEVGG 628
G GG PP P PY GG P G GG P P GG P GG
Sbjct: 92 GGPGGQPPYAGGP-----GGQPPYVGG-PGGQPHYGGGAP---PPQAFGGYPPGPAGPGG 142
Query: 629 TP*PD*GAPCG 661
P G P G
Sbjct: 143 PPNAFGGYPPG 153
Score = 34.7 bits (78), Expect = 1.2
Identities = 37/103 (35%), Positives = 42/103 (39%), Gaps = 23/103 (22%)
Frame = +2
Query: 257 PSLLPRVFPPSPALP----SPEYAEG--------GG*P----AP*ALLPYVGGA*A*PD* 388
P P + P P +P +P Y G GG P P PYVGG P
Sbjct: 61 PGPQPAGYAPVPQMPPYGEAPPYGAGQPPYMGGPGGQPPYAGGPGGQPPYVGGPGGQPHY 120
Query: 389 PPGAP----YGGAPYPGCTAPP*GGWE---GGYPPV*P*PPVV 496
GAP +GG P PG P GG GGYPP P P+V
Sbjct: 121 GGGAPPPQAFGGYP-PGPAGP--GGPPNAFGGYPPGQPQQPIV 160
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 731,690,634
Number of Sequences: 1393205
Number of extensions: 22002691
Number of successful extensions: 169077
Number of sequences better than 10.0: 6149
Number of HSP's better than 10.0 without gapping: 87207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130436
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30270070164
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
