Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001111A_C01 KMC001111A_c01
(581 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568377.1| putative protein; protein id: At5g19600.1, supp... 56 3e-07
dbj|BAB68064.1| sulfate transporter-like protein [Oryza sativa (... 51 1e-05
sp|P53393|SUT3_STYHA Low affinity sulphate transporter 3 gi|1085... 48 8e-05
dbj|BAB92305.1| putative sulfate transporter [Oryza sativa (japo... 45 9e-04
pir||T51839 sulfate transport protein [imported] - Arabidopsis t... 44 0.002
>ref|NP_568377.1| putative protein; protein id: At5g19600.1, supported by cDNA:
gi_14141683 [Arabidopsis thaliana]
gi|14141684|dbj|BAB55634.1| sulfate transporter
[Arabidopsis thaliana]
Length = 634
Score = 56.2 bits (134), Expect = 3e-07
Identities = 23/50 (46%), Positives = 39/50 (78%)
Frame = -3
Query: 579 LEKNGIEMFLVNPRLEFMEKLIISKFVDKLGKESFYLTLDDAVKASQYSL 430
L I+M ++NPR E +EK+++S FV+K+GKE +L++DDAV+A +++L
Sbjct: 578 LGSKNIKMVIINPRFEVLEKMMLSHFVEKIGKEYMFLSIDDAVQACRFNL 627
>dbj|BAB68064.1| sulfate transporter-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 666
Score = 50.8 bits (120), Expect = 1e-05
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = -3
Query: 579 LEKNGIEMFLVNPRLEFMEKLIISKFV-DKLGKESFYLTLDDAVKASQYSLKKNDN 415
LE+ GI + L NPRLE EKL++S +V D LG E +LT+ DA+ A +Y+L+ + N
Sbjct: 605 LERRGITIALTNPRLEVTEKLVLSGYVRDILGDEWVFLTVKDAITACRYALQISRN 660
>sp|P53393|SUT3_STYHA Low affinity sulphate transporter 3 gi|1085993|pir||S51765 sulfate
transport protein 3, low affinity - Stylosanthes hamata
gi|607188|emb|CAA57831.1| low affinity sulphate
transporter [Stylosanthes hamata]
Length = 644
Score = 48.1 bits (113), Expect = 8e-05
Identities = 22/45 (48%), Positives = 32/45 (70%)
Frame = -3
Query: 579 LEKNGIEMFLVNPRLEFMEKLIISKFVDKLGKESFYLTLDDAVKA 445
L G+E+ +VNPR E + KL ++ FVDK+GKE +LT+ +AV A
Sbjct: 590 LLSRGVELAMVNPRWEVIHKLKVANFVDKIGKERVFLTVAEAVDA 634
>dbj|BAB92305.1| putative sulfate transporter [Oryza sativa (japonica
cultivar-group)]
Length = 659
Score = 44.7 bits (104), Expect = 9e-04
Identities = 19/58 (32%), Positives = 38/58 (64%)
Frame = -3
Query: 579 LEKNGIEMFLVNPRLEFMEKLIISKFVDKLGKESFYLTLDDAVKASQYSLKKNDNGDI 406
LE+ G++M + NPR+ EKL++S + +G+ +L+ DA+ A +Y+L+ + +G +
Sbjct: 599 LERKGMKMAVTNPRMAVAEKLVLSGLAELVGESWMFLSNGDALAACRYTLQGSKHGGV 656
>pir||T51839 sulfate transport protein [imported] - Arabidopsis thaliana
gi|3777483|dbj|BAA33932.1| sulfate transporter
[Arabidopsis thaliana]
Length = 649
Score = 43.5 bits (101), Expect = 0.002
Identities = 20/43 (46%), Positives = 31/43 (71%)
Frame = -3
Query: 579 LEKNGIEMFLVNPRLEFMEKLIISKFVDKLGKESFYLTLDDAV 451
LEK I++ L NP +EKL SKFV+++G+++ +LT+ DAV
Sbjct: 595 LEKQEIQLILANPGPVVIEKLYASKFVEEIGEKNIFLTVGDAV 637
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 493,415,708
Number of Sequences: 1393205
Number of extensions: 10516631
Number of successful extensions: 19952
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 19394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19910
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
