Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001105A_C01 KMC001105A_c01
(480 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD31716.1| putative ripening related protein [Cicer arietinum] 117 8e-26
gb|AAD50376.1|AF127110_1 ripening related protein [Glycine max] 106 1e-22
ref|NP_177243.1| major latex protein (MLP)-related; protein id: ... 69 3e-11
ref|NP_198153.1| Csf-2-related; protein id: At5g28010.1 [Arabido... 67 1e-10
emb|CAB60268.1| major latex protein homolog [Glycine max] 66 2e-10
>emb|CAD31716.1| putative ripening related protein [Cicer arietinum]
Length = 152
Score = 117 bits (292), Expect = 8e-26
Identities = 51/87 (58%), Positives = 65/87 (74%)
Frame = -1
Query: 480 KVITCLERIEAIDEQNKTNKYTLFGGDVSSHYKKFTLIFQVIENNDGHDAVKWTVEYEKL 301
KV TC E +E +DEQNK Y LFGGD+ HYK F LI QV + +DG AVKWT+EYEK+
Sbjct: 65 KVHTCNESVEEVDEQNKKITYKLFGGDIDEHYKVFKLILQVFDKSDGSGAVKWTIEYEKI 124
Query: 300 REDIEPPNGYLDYFNKLTRDVDAHLIQ 220
EDI PPNG++DY +K TRD+D +L++
Sbjct: 125 NEDIYPPNGWMDYLSKCTRDLDGNLVK 151
>gb|AAD50376.1|AF127110_1 ripening related protein [Glycine max]
Length = 152
Score = 106 bits (265), Expect = 1e-22
Identities = 43/87 (49%), Positives = 65/87 (74%)
Frame = -1
Query: 480 KVITCLERIEAIDEQNKTNKYTLFGGDVSSHYKKFTLIFQVIENNDGHDAVKWTVEYEKL 301
KV TC E IE++DE+NKT Y LF GD+ + +K F LIFQ I+ + +KWT+EYE++
Sbjct: 65 KVTTCKESIESVDEENKTINYKLFDGDIDNQFKVFKLIFQAIDKENDSAIIKWTIEYERI 124
Query: 300 REDIEPPNGYLDYFNKLTRDVDAHLIQ 220
E+++PP GY++Y +K T+D+DAHL++
Sbjct: 125 GEEVDPPYGYIEYVHKCTKDIDAHLLK 151
>ref|NP_177243.1| major latex protein (MLP)-related; protein id: At1g70870.1
[Arabidopsis thaliana]
Length = 139
Score = 68.6 bits (166), Expect = 3e-11
Identities = 35/87 (40%), Positives = 51/87 (58%)
Frame = -1
Query: 480 KVITCLERIEAIDEQNKTNKYTLFGGDVSSHYKKFTLIFQVIENNDGHDAVKWTVEYEKL 301
KV ER+E IDE NK+ +F GDV +Y FT Q+I G +W+ EYEKL
Sbjct: 53 KVEKMKERVE-IDEANKSMTVFVFEGDVMENYSSFTCNLQIIPKLHGRSIARWSWEYEKL 111
Query: 300 REDIEPPNGYLDYFNKLTRDVDAHLIQ 220
D PN Y+D+ LT+D++++L++
Sbjct: 112 NADSPAPNKYMDFAVYLTKDIESNLLK 138
>ref|NP_198153.1| Csf-2-related; protein id: At5g28010.1 [Arabidopsis thaliana]
Length = 166
Score = 67.0 bits (162), Expect = 1e-10
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = -1
Query: 462 ERIEAIDEQNKTNKYTLFGGDVSSHYKKFTLIFQVIENNDGHDAV-KWTVEYEKLREDIE 286
ERIE ++ + K K+ + GDV + YK F + QV G +V KW +EYEK+ E++
Sbjct: 83 ERIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGGTGSVVKWHIEYEKIDENVP 142
Query: 285 PPNGYLDYFNKLTRDVDAHLI 223
P L +F ++T+++D HL+
Sbjct: 143 HPENLLPFFAEMTKEIDEHLL 163
>emb|CAB60268.1| major latex protein homolog [Glycine max]
Length = 153
Score = 66.2 bits (160), Expect = 2e-10
Identities = 33/86 (38%), Positives = 49/86 (56%)
Frame = -1
Query: 477 VITCLERIEAIDEQNKTNKYTLFGGDVSSHYKKFTLIFQVIENNDGHDAVKWTVEYEKLR 298
V T ER++ D++NK YT+ G + +YK + +I V+ D H VKWT YEK+
Sbjct: 67 VETLKERVD-FDDENKKITYTILEGVMLKYYKSYKVIVHVLPKGDEHSLVKWTFLYEKVD 125
Query: 297 EDIEPPNGYLDYFNKLTRDVDAHLIQ 220
P Y D KLT++V+AHL++
Sbjct: 126 HTAPEPTKYKDLVVKLTKNVEAHLVE 151
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 392,044,639
Number of Sequences: 1393205
Number of extensions: 7603472
Number of successful extensions: 19896
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 19265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19849
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13397825772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
