Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001064A_C01 KMC001064A_c01
(668 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO64172.1| unknown protein [Arabidopsis thaliana] 136 2e-31
ref|NP_191909.1| putative protein; protein id: At3g63500.1 [Arab... 136 2e-31
pir||F86281 protein F10B6.14 [imported] - Arabidopsis thaliana g... 114 9e-25
ref|NP_563958.1| expressed protein; protein id: At1g14740.1, sup... 114 9e-25
ref|NP_199627.1| putative protein; protein id: At5g48160.1 [Arab... 75 6e-13
>gb|AAO64172.1| unknown protein [Arabidopsis thaliana]
Length = 975
Score = 136 bits (343), Expect = 2e-31
Identities = 66/111 (59%), Positives = 90/111 (80%)
Frame = -2
Query: 598 KDFQFDELESIVKIKQAEAKMFQSRSDDARREAEGLKRISLAKSEKIEEEYNNRLAKLRL 419
K+ +F+ELESIV++KQAEA+MFQ R+DDARREAEGLKRI++AK EKIEEEYN R+ KL +
Sbjct: 865 KEPRFEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSM 924
Query: 418 VETDEMRKQKVEELQALERAHLEYLHMKNRMESDIKDLLSKMEATKMSLAM 266
+ E R+++ EEL+A++R E+ MK RME +++ LL+KME TK SLA+
Sbjct: 925 EDAQERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMTKQSLAL 975
>ref|NP_191909.1| putative protein; protein id: At3g63500.1 [Arabidopsis thaliana]
gi|11288851|pir||T49191 hypothetical protein MAA21.130 -
Arabidopsis thaliana gi|7573333|emb|CAB87803.1| putative
protein [Arabidopsis thaliana]
Length = 1162
Score = 136 bits (343), Expect = 2e-31
Identities = 66/111 (59%), Positives = 90/111 (80%)
Frame = -2
Query: 598 KDFQFDELESIVKIKQAEAKMFQSRSDDARREAEGLKRISLAKSEKIEEEYNNRLAKLRL 419
K+ +F+ELESIV++KQAEA+MFQ R+DDARREAEGLKRI++AK EKIEEEYN R+ KL +
Sbjct: 1052 KEPRFEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSM 1111
Query: 418 VETDEMRKQKVEELQALERAHLEYLHMKNRMESDIKDLLSKMEATKMSLAM 266
+ E R+++ EEL+A++R E+ MK RME +++ LL+KME TK SLA+
Sbjct: 1112 EDAQERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMTKQSLAL 1162
>pir||F86281 protein F10B6.14 [imported] - Arabidopsis thaliana
gi|8778236|gb|AAF79245.1|AC006917_30 F10B6.14
[Arabidopsis thaliana]
Length = 760
Score = 114 bits (286), Expect = 9e-25
Identities = 56/105 (53%), Positives = 79/105 (74%)
Frame = -2
Query: 586 FDELESIVKIKQAEAKMFQSRSDDARREAEGLKRISLAKSEKIEEEYNNRLAKLRLVETD 407
FD LES+V+IK+AE +MFQ ++D+AR EAE KR+ K+EK+EEEY +LA+L L ET+
Sbjct: 655 FDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKTEKMEEEYTEKLARLCLQETE 714
Query: 406 EMRKQKVEELQALERAHLEYLHMKNRMESDIKDLLSKMEATKMSL 272
E R+ K+EEL+ LE +H +Y +MK RME++I LL +ME T+ L
Sbjct: 715 ERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVTRQQL 759
>ref|NP_563958.1| expressed protein; protein id: At1g14740.1, supported by cDNA:
gi_14596044, supported by cDNA: gi_20148718 [Arabidopsis
thaliana] gi|14596045|gb|AAK68750.1| Unknown protein
[Arabidopsis thaliana] gi|20148719|gb|AAM10250.1|
unknown protein [Arabidopsis thaliana]
Length = 733
Score = 114 bits (286), Expect = 9e-25
Identities = 56/105 (53%), Positives = 79/105 (74%)
Frame = -2
Query: 586 FDELESIVKIKQAEAKMFQSRSDDARREAEGLKRISLAKSEKIEEEYNNRLAKLRLVETD 407
FD LES+V+IK+AE +MFQ ++D+AR EAE KR+ K+EK+EEEY +LA+L L ET+
Sbjct: 628 FDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKTEKMEEEYTEKLARLCLQETE 687
Query: 406 EMRKQKVEELQALERAHLEYLHMKNRMESDIKDLLSKMEATKMSL 272
E R+ K+EEL+ LE +H +Y +MK RME++I LL +ME T+ L
Sbjct: 688 ERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVTRQQL 732
>ref|NP_199627.1| putative protein; protein id: At5g48160.1 [Arabidopsis thaliana]
gi|8777406|dbj|BAA96996.1|
gb|AAF13095.1~gene_id:MIF21.5~strong similarity to
unknown protein [Arabidopsis thaliana]
Length = 574
Score = 75.5 bits (184), Expect = 6e-13
Identities = 40/97 (41%), Positives = 61/97 (62%)
Frame = -2
Query: 643 DKRSLAQEFQMSIVQKDFQFDELESIVKIKQAEAKMFQSRSDDARREAEGLKRISLAKSE 464
DK E + +K Q DELE IV++KQAEA MFQ ++++A+REA+ L+RI LAK +
Sbjct: 431 DKAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMD 490
Query: 463 KIEEEYNNRLAKLRLVETDEMRKQKVEELQALERAHL 353
K EEEY + K RL E + ++ E+++ E + +
Sbjct: 491 KSEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRV 527
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 486,266,749
Number of Sequences: 1393205
Number of extensions: 9246541
Number of successful extensions: 29061
Number of sequences better than 10.0: 360
Number of HSP's better than 10.0 without gapping: 27259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28852
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29138478756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
