Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001061A_C01 KMC001061A_c01
(647 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN86062.1| sugar transporter [Citrus unshiu] 74 2e-12
ref|NP_176898.1| integral membrane protein, putative; protein id... 67 2e-10
gb|AAF68114.1|AC010793_9 F20B17.24 [Arabidopsis thaliana] 57 2e-07
ref|NP_178100.2| hexose transporter, putative; protein id: At1g7... 57 2e-07
pir||B96829 probable sugar transporter, 77409-81599 [imported] -... 57 2e-07
>gb|AAN86062.1| sugar transporter [Citrus unshiu]
Length = 489
Score = 73.9 bits (180), Expect = 2e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 647 LLYSMFATFCIMAVIFVKRNVVETKGKSLQEIEIALLPQE 528
LLYS+F TFC+MAV FVKRNVVETKGKSLQEIEIALLPQE
Sbjct: 450 LLYSIFGTFCLMAVAFVKRNVVETKGKSLQEIEIALLPQE 489
>ref|NP_176898.1| integral membrane protein, putative; protein id: At1g67300.1
[Arabidopsis thaliana] gi|25308940|pir||F96696 protein
F1N21.12 [imported] - Arabidopsis thaliana
gi|9828628|gb|AAG00251.1|AC002130_16 F1N21.12
[Arabidopsis thaliana]
Length = 493
Score = 67.4 bits (163), Expect = 2e-10
Identities = 31/37 (83%), Positives = 37/37 (99%)
Frame = -1
Query: 647 LLYSMFATFCIMAVIFVKRNVVETKGKSLQEIEIALL 537
LLYSMF+TFC+MAV+FVKRNV+ETKGK+LQEIEI+LL
Sbjct: 454 LLYSMFSTFCLMAVMFVKRNVIETKGKTLQEIEISLL 490
>gb|AAF68114.1|AC010793_9 F20B17.24 [Arabidopsis thaliana]
Length = 472
Score = 57.0 bits (136), Expect = 2e-07
Identities = 27/37 (72%), Positives = 34/37 (90%)
Frame = -1
Query: 647 LLYSMFATFCIMAVIFVKRNVVETKGKSLQEIEIALL 537
LL ++F FC++AVIFV++NVVETKGKSLQEIEI+LL
Sbjct: 432 LLNAIFGFFCVVAVIFVQKNVVETKGKSLQEIEISLL 468
>ref|NP_178100.2| hexose transporter, putative; protein id: At1g79820.1, supported by
cDNA: gi_19347893 [Arabidopsis thaliana]
gi|19347894|gb|AAL85970.1| putative hexose transporter
protein [Arabidopsis thaliana]
Length = 363
Score = 57.0 bits (136), Expect = 2e-07
Identities = 27/37 (72%), Positives = 34/37 (90%)
Frame = -1
Query: 647 LLYSMFATFCIMAVIFVKRNVVETKGKSLQEIEIALL 537
LL ++F FC++AVIFV++NVVETKGKSLQEIEI+LL
Sbjct: 323 LLNAIFGFFCVVAVIFVQKNVVETKGKSLQEIEISLL 359
>pir||B96829 probable sugar transporter, 77409-81599 [imported] - Arabidopsis
thaliana gi|12324590|gb|AAG52251.1|AC011717_19 putative
sugar transporter; 77409-81599 [Arabidopsis thaliana]
Length = 467
Score = 57.0 bits (136), Expect = 2e-07
Identities = 27/37 (72%), Positives = 34/37 (90%)
Frame = -1
Query: 647 LLYSMFATFCIMAVIFVKRNVVETKGKSLQEIEIALL 537
LL ++F FC++AVIFV++NVVETKGKSLQEIEI+LL
Sbjct: 427 LLNAIFGFFCVVAVIFVQKNVVETKGKSLQEIEISLL 463
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 522,872,200
Number of Sequences: 1393205
Number of extensions: 10530380
Number of successful extensions: 27764
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 26882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27761
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27576232529
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
