Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001044A_C01 KMC001044A_c01
(727 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51098 hypothetical protein p85RF [imported] - Prunus armen... 140 2e-32
ref|NP_564585.1| expressed protein; protein id: At1g51200.1, sup... 115 5e-25
gb|AAN71995.1| expressed protein [Arabidopsis thaliana] 115 5e-25
pir||T11846 pathogenesis-related protein 3 - kidney bean gi|1693... 103 2e-21
ref|NP_566429.1| expressed protein; protein id: At3g12630.1 [Ara... 102 5e-21
>pir||T51098 hypothetical protein p85RF [imported] - Prunus armeniaca
gi|5031281|gb|AAD38146.1|AF139499_1 unknown [Prunus
armeniaca]
Length = 173
Score = 140 bits (353), Expect = 2e-32
Identities = 63/74 (85%), Positives = 68/74 (91%)
Frame = -1
Query: 727 GESGEEKPKDGPKRCSSCNKRVGLTGFNCRCGHLFCAVHRYSDKHDCPFDYRTAARDAIA 548
G SGE KP +GPKRC +CNKRVGLTGFNCRCGHLFCAVHRYSDKHDCP+DY TAARD IA
Sbjct: 101 GGSGEAKP-EGPKRCGTCNKRVGLTGFNCRCGHLFCAVHRYSDKHDCPYDYHTAARDVIA 159
Query: 547 KANPVVKAEKLDKI 506
KANPVVKA+KL+KI
Sbjct: 160 KANPVVKADKLEKI 173
>ref|NP_564585.1| expressed protein; protein id: At1g51200.1, supported by cDNA:
gi_15912334 [Arabidopsis thaliana]
gi|25405449|pir||G96549 hypothetical protein F11M15.7
[imported] - Arabidopsis thaliana
gi|4836932|gb|AAD30634.1|AC006085_7 Unknown protein
[Arabidopsis thaliana] gi|15912335|gb|AAL08301.1|
At1g51200/F11M15_6 [Arabidopsis thaliana]
Length = 173
Score = 115 bits (289), Expect = 5e-25
Identities = 52/68 (76%), Positives = 58/68 (84%)
Frame = -1
Query: 709 KPKDGPKRCSSCNKRVGLTGFNCRCGHLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVV 530
KPK GP RC++CNKRVGLTGF CRCG LFC HRY+D HDC F+Y AA++AIAKANPVV
Sbjct: 107 KPK-GPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVV 165
Query: 529 KAEKLDKI 506
KAEKLDKI
Sbjct: 166 KAEKLDKI 173
>gb|AAN71995.1| expressed protein [Arabidopsis thaliana]
Length = 173
Score = 115 bits (289), Expect = 5e-25
Identities = 52/68 (76%), Positives = 58/68 (84%)
Frame = -1
Query: 709 KPKDGPKRCSSCNKRVGLTGFNCRCGHLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVV 530
KPK GP RC++CNKRVGLTGF CRCG LFC HRY+D HDC F+Y AA++AIAKANPVV
Sbjct: 107 KPK-GPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVV 165
Query: 529 KAEKLDKI 506
KAEKLDKI
Sbjct: 166 KAEKLDKI 173
>pir||T11846 pathogenesis-related protein 3 - kidney bean
gi|169363|gb|AAA33773.1| PVPR3
Length = 137
Score = 103 bits (258), Expect = 2e-21
Identities = 43/68 (63%), Positives = 53/68 (77%)
Frame = -1
Query: 709 KPKDGPKRCSSCNKRVGLTGFNCRCGHLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVV 530
+PK RCS C +RVGLTGF CRCG LFCA HRY+D+HDC +DY+T R+AIA+ NPVV
Sbjct: 70 EPKRAVNRCSGCRRRVGLTGFRCRCGDLFCAEHRYTDRHDCSYDYKTVGREAIARENPVV 129
Query: 529 KAEKLDKI 506
KA K+ K+
Sbjct: 130 KAAKIVKV 137
>ref|NP_566429.1| expressed protein; protein id: At3g12630.1 [Arabidopsis thaliana]
gi|9294357|dbj|BAB02254.1| contains similarity to
unknown protein~gb|AAA33773.1~gene_id:MMF12.7
[Arabidopsis thaliana]
gi|12321951|gb|AAG51008.1|AC069474_7 unknown protein;
15087-14605 [Arabidopsis thaliana]
gi|21536983|gb|AAM61324.1| unknown [Arabidopsis
thaliana]
Length = 160
Score = 102 bits (254), Expect = 5e-21
Identities = 42/61 (68%), Positives = 51/61 (82%)
Frame = -1
Query: 688 RCSSCNKRVGLTGFNCRCGHLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDK 509
RCS C K+VGLTGF CRCG LFC+ HRYSD+HDC +DY+TA R+AIA+ NPVVKA K+ K
Sbjct: 100 RCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVK 159
Query: 508 I 506
+
Sbjct: 160 V 160
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 613,715,492
Number of Sequences: 1393205
Number of extensions: 13307329
Number of successful extensions: 33200
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 31841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33175
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34062062287
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
