Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001022A_C02 KMC001022A_c02
(1015 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180241.1| leucine-rich repeat transmembrane protein kinas... 278 1e-73
gb|AAK92807.1| putative receptor protein kinase [Arabidopsis tha... 278 1e-73
ref|NP_200638.1| leucine-rich repeat transmembrane protein kinas... 204 1e-51
dbj|BAB84843.1| receptor-like protein kinase-like [Oryza sativa ... 192 5e-48
gb|AAK18840.1|AC082645_10 putative receptor kinase [Oryza sativa] 188 1e-46
>ref|NP_180241.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At2g26730.1, supported by cDNA: gi_15292872
[Arabidopsis thaliana] gi|25407845|pir||B84664 probable
receptor-like protein kinase [imported] - Arabidopsis
thaliana gi|2760839|gb|AAB95307.1| putative receptor-like
protein kinase [Arabidopsis thaliana]
Length = 658
Score = 278 bits (711), Expect = 1e-73
Identities = 144/181 (79%), Positives = 158/181 (86%), Gaps = 2/181 (1%)
Frame = -2
Query: 1014 IKSSNILLRGTDHHASVSDFGLNPLFGNGASSNRVAGYRAPEVVETRKVTFKSDVYSFGV 835
IK+SNILL + VSD+GLN LF N + NR+AGY APEV+ETRKVTFKSDVYSFGV
Sbjct: 476 IKASNILLH-PNQDTCVSDYGLNQLFSNSSPPNRLAGYHAPEVLETRKVTFKSDVYSFGV 534
Query: 834 LLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFQNIEEEMVQLLQI 655
LLLELLTGK+PNQASLGEEGIDLPRWV SVVREEWTAEVFD ELMR+ NIEEEMVQLLQI
Sbjct: 535 LLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQI 594
Query: 654 AMACVSIVPDQRPTMQDVVRMIEDMNRGE-TDEGMRQSSDDPSKESEGHTPP-QSRTPPR 481
AMACVS VPDQRP MQ+V+RMIED+NR E TD+G+RQSSDDPSK SEG TPP +SRTPPR
Sbjct: 595 AMACVSTVPDQRPVMQEVLRMIEDVNRSETTDDGLRQSSDDPSKGSEGQTPPGESRTPPR 654
Query: 480 S 478
S
Sbjct: 655 S 655
>gb|AAK92807.1| putative receptor protein kinase [Arabidopsis thaliana]
Length = 658
Score = 278 bits (711), Expect = 1e-73
Identities = 144/181 (79%), Positives = 158/181 (86%), Gaps = 2/181 (1%)
Frame = -2
Query: 1014 IKSSNILLRGTDHHASVSDFGLNPLFGNGASSNRVAGYRAPEVVETRKVTFKSDVYSFGV 835
IK+SNILL + VSD+GLN LF N + NR+AGY APEV+ETRKVTFKSDVYSFGV
Sbjct: 476 IKASNILLH-PNQDTCVSDYGLNQLFSNSSPPNRLAGYHAPEVLETRKVTFKSDVYSFGV 534
Query: 834 LLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFQNIEEEMVQLLQI 655
LLLELLTGK+PNQASLGEEGIDLPRWV SVVREEWTAEVFD ELMR+ NIEEEMVQLLQI
Sbjct: 535 LLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQI 594
Query: 654 AMACVSIVPDQRPTMQDVVRMIEDMNRGE-TDEGMRQSSDDPSKESEGHTPP-QSRTPPR 481
AMACVS VPDQRP MQ+V+RMIED+NR E TD+G+RQSSDDPSK SEG TPP +SRTPPR
Sbjct: 595 AMACVSTVPDQRPVMQEVLRMIEDVNRSETTDDGLRQSSDDPSKGSEGQTPPGESRTPPR 654
Query: 480 S 478
S
Sbjct: 655 S 655
>ref|NP_200638.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g58300.1, supported by cDNA: gi_18086390
[Arabidopsis thaliana] gi|8777331|dbj|BAA96921.1|
receptor-like protein kinase [Arabidopsis thaliana]
gi|18086391|gb|AAL57654.1| unknown protein [Arabidopsis
thaliana] gi|24797034|gb|AAN64529.1| At5g58299/At5g58299
[Arabidopsis thaliana]
Length = 654
Score = 204 bits (520), Expect = 1e-51
Identities = 108/168 (64%), Positives = 131/168 (77%)
Frame = -2
Query: 1014 IKSSNILLRGTDHHASVSDFGLNPLFGNGASSNRVAGYRAPEVVETRKVTFKSDVYSFGV 835
IKSSN++++ + A +SDFGL PL + R AGYRAPEV+ETRK T KSDVYSFGV
Sbjct: 486 IKSSNVIMK-QESDACISDFGLTPLMAVPIAPMRGAGYRAPEVMETRKHTHKSDVYSFGV 544
Query: 834 LLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFQNIEEEMVQLLQI 655
L+LE+LTGK+P Q+ ++ +DLPRWVQSVVREEWT+EVFD ELMRFQNIEEEMVQ+LQI
Sbjct: 545 LILEMLTGKSPVQSPSRDDMVDLPRWVQSVVREEWTSEVFDIELMRFQNIEEEMVQMLQI 604
Query: 654 AMACVSIVPDQRPTMQDVVRMIEDMNRGETDEGMRQSSDDPSKESEGH 511
AMACV+ VP+ RPTM DVVRMIE++ R E R SSDD SK + +
Sbjct: 605 AMACVAQVPEVRPTMDDVVRMIEEI-RVSDSETTRPSSDDNSKPKDSN 651
>dbj|BAB84843.1| receptor-like protein kinase-like [Oryza sativa (japonica
cultivar-group)] gi|20804803|dbj|BAB92487.1|
receptor-like protein kinase-like [Oryza sativa (japonica
cultivar-group)]
Length = 206
Score = 192 bits (489), Expect = 5e-48
Identities = 106/185 (57%), Positives = 134/185 (72%), Gaps = 9/185 (4%)
Frame = -2
Query: 1014 IKSSNILLRGTDHHASVSDFGLNPLFGNGASSNRVAGYRAPEVVETRKVTFKSDVYSFGV 835
+KSSN+LLR A++SDF L+P+F ++ GYRAPEVV+TR+ T+K+DVYS GV
Sbjct: 25 VKSSNVLLRPDADAAALSDFCLHPIFAPSSARPGAGGYRAPEVVDTRRPTYKADVYSLGV 84
Query: 834 LLLELLTGKAPNQASL-GEEGIDLPRWVQSVVREEWTAEVFDAELMRF-QNIEEEMVQLL 661
LLLELLTGK+P ASL G+ +DLPRWVQSVVREEWTAEVFD EL+R + EEEMV LL
Sbjct: 85 LLLELLTGKSPTHASLEGDGTLDLPRWVQSVVREEWTAEVFDVELVRLGASAEEEMVALL 144
Query: 660 QIAMACVSIVPDQRPTMQDVVRMIEDMNRG-------ETDEGMRQSSDDPSKESEGHTPP 502
Q+AMACV+ VPD RP DVVRMIE++ G E++EG+R +S++ E TPP
Sbjct: 145 QVAMACVATVPDARPDAPDVVRMIEEIGGGHGRTTTEESEEGVRGTSEE---ERSRGTPP 201
Query: 501 QSRTP 487
+ TP
Sbjct: 202 AAPTP 206
>gb|AAK18840.1|AC082645_10 putative receptor kinase [Oryza sativa]
Length = 686
Score = 188 bits (478), Expect = 1e-46
Identities = 96/165 (58%), Positives = 127/165 (76%)
Frame = -2
Query: 1014 IKSSNILLRGTDHHASVSDFGLNPLFGNGASSNRVAGYRAPEVVETRKVTFKSDVYSFGV 835
IKSSN+LL + + A +SD GL+ L G ++ +R +GYRAPEV + R+V+ K+DVYSFGV
Sbjct: 503 IKSSNVLLNKS-YQARLSDNGLSALVGPSSAPSRASGYRAPEVTDPRRVSQKADVYSFGV 561
Query: 834 LLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFQNIEEEMVQLLQI 655
LLLELLTGKAP+QA+L +EG+DLPRWVQSVVR EWTAEVFD EL+R+QN+EE+MVQLLQ+
Sbjct: 562 LLLELLTGKAPSQAALNDEGVDLPRWVQSVVRSEWTAEVFDMELLRYQNVEEQMVQLLQL 621
Query: 654 AMACVSIVPDQRPTMQDVVRMIEDMNRGETDEGMRQSSDDPSKES 520
A+ CV+ VPD RP+M VV IE++ + R DP +++
Sbjct: 622 AIDCVAQVPDARPSMPHVVLRIEEIKKSSE----RLEGRDPQQQA 662
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 980,387,850
Number of Sequences: 1393205
Number of extensions: 24129669
Number of successful extensions: 90093
Number of sequences better than 10.0: 5420
Number of HSP's better than 10.0 without gapping: 79074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88101
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 58773479151
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
