Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001018A_C01 KMC001018A_c01
(686 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC85667.1| zeta-carotene desaturase [Citrus sinensis] 275 6e-73
dbj|BAB68552.1| zeta-carotene desaturase [Citrus unshiu] 275 6e-73
gb|AAK51557.1|AF372617_1 zeta-carotene desaturase precursor [Cit... 275 6e-73
sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplast precur... 271 6e-72
sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplast precur... 270 1e-71
>emb|CAC85667.1| zeta-carotene desaturase [Citrus sinensis]
Length = 570
Score = 275 bits (702), Expect = 6e-73
Identities = 138/161 (85%), Positives = 146/161 (89%), Gaps = 3/161 (1%)
Frame = -3
Query: 684 DFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPSSQG 505
DFSCFADLALTSPEDYY EGQGSLLQCVLTPGDPYMPLPN+EII RVAKQV++LFPSSQG
Sbjct: 410 DFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQG 469
Query: 504 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 325
LEV WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ
Sbjct: 470 LEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 529
Query: 324 ASACICDAGEELLTLRKKLDEFEDDLQI---SNTKDELSLV 211
ASA IC+AGEEL+ LRK+L FE Q+ + T DELSLV
Sbjct: 530 ASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 570
>dbj|BAB68552.1| zeta-carotene desaturase [Citrus unshiu]
Length = 570
Score = 275 bits (702), Expect = 6e-73
Identities = 138/161 (85%), Positives = 146/161 (89%), Gaps = 3/161 (1%)
Frame = -3
Query: 684 DFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPSSQG 505
DFSCFADLALTSPEDYY EGQGSLLQCVLTPGDPYMPLPN+EII RVAKQV++LFPSSQG
Sbjct: 410 DFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQG 469
Query: 504 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 325
LEV WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ
Sbjct: 470 LEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 529
Query: 324 ASACICDAGEELLTLRKKLDEFEDDLQI---SNTKDELSLV 211
ASA IC+AGEEL+ LRK+L FE Q+ + T DELSLV
Sbjct: 530 ASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 570
>gb|AAK51557.1|AF372617_1 zeta-carotene desaturase precursor [Citrus x paradisi]
Length = 570
Score = 275 bits (702), Expect = 6e-73
Identities = 138/161 (85%), Positives = 146/161 (89%), Gaps = 3/161 (1%)
Frame = -3
Query: 684 DFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPSSQG 505
DFSCFADLALTSPEDYY EGQGSLLQCVLTPGDPYMPLPN+EII RVAKQV++LFPSSQG
Sbjct: 410 DFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQG 469
Query: 504 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 325
LEV WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ
Sbjct: 470 LEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 529
Query: 324 ASACICDAGEELLTLRKKLDEFEDDLQI---SNTKDELSLV 211
ASA IC+AGEEL+ LRK+L FE Q+ + T DELSLV
Sbjct: 530 ASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 570
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplast precursor (Carotene
7,8-desaturase) gi|2129927|pir||S66625 zeta-carotene
desaturase precursor - pepper gi|1176437|gb|AAB35386.1|
zeta-carotene desaturase, CapZDS=phytoene desaturase
homolog [Capsicum annuum, early ripening fruit, Peptide,
588 aa] gi|6006401|emb|CAA61985.1| zeta-carotene
/neurosporene dehydrogenase (desaturase) [Capsicum
annuum]
Length = 588
Score = 271 bits (693), Expect = 6e-72
Identities = 138/163 (84%), Positives = 146/163 (88%), Gaps = 5/163 (3%)
Frame = -3
Query: 684 DFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPSSQG 505
DFSCFADLAL SPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEII RV+KQV++LFPSSQG
Sbjct: 429 DFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPSSQG 488
Query: 504 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 325
LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPV+NFFLAGSYTKQDYIDSMEGATLSGRQ
Sbjct: 489 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQ 548
Query: 324 ASACICDAGEELLTLRKK-----LDEFEDDLQISNTKDELSLV 211
ASA ICDAGE+LL LRKK L+E + +S DELSLV
Sbjct: 549 ASAYICDAGEQLLALRKKIAAAELNEISKGVSLS---DELSLV 588
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplast precursor (Carotene
7,8-desaturase) gi|9971810|gb|AAG10425.1| zeta
desaturase [Tagetes erecta]
Length = 587
Score = 270 bits (691), Expect = 1e-71
Identities = 136/158 (86%), Positives = 143/158 (90%)
Frame = -3
Query: 684 DFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPSSQG 505
DFSCFADLAL SPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEII+RV+KQV++LFPSSQG
Sbjct: 432 DFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFPSSQG 491
Query: 504 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 325
LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ
Sbjct: 492 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQ 551
Query: 324 ASACICDAGEELLTLRKKLDEFEDDLQISNTKDELSLV 211
ASA ICDAGEEL LRK+L + I DE+SLV
Sbjct: 552 ASAFICDAGEELAALRKQLAAIQSIDSIG--VDEMSLV 587
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 578,951,240
Number of Sequences: 1393205
Number of extensions: 12167411
Number of successful extensions: 25834
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 24906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25758
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30835865868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
