Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000993A_C01 KMC000993A_c01
(539 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA75092.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synt... 113 7e-26
sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase... 112 9e-26
sp|P37216|AROG_LYCES Phospho-2-dehydro-3-deoxyheptonate aldolase... 112 9e-26
sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase... 110 4e-25
emb|CAA75386.1| 2-dehydro-3-deoxyphosphoheptonate aldolase; 3-de... 110 4e-25
>emb|CAA75092.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Morinda
citrifolia]
Length = 535
Score = 113 bits (282), Expect(2) = 7e-26
Identities = 54/59 (91%), Positives = 57/59 (96%)
Frame = -2
Query: 448 GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRIGSEQSLS 272
GQNVTECIGGSRTVTFDDL SRYHTHCDPRLNASQSLELAFIIAERLRKRR+GS +SL+
Sbjct: 476 GQNVTECIGGSRTVTFDDLGSRYHTHCDPRLNASQSLELAFIIAERLRKRRLGSPKSLA 534
Score = 25.4 bits (54), Expect(2) = 7e-26
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 489 KEGXPPSGVHLEMT 448
+EG P GVHLEMT
Sbjct: 462 QEGSHPGGVHLEMT 475
>sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast
precursor (Phospho-2-keto-3-deoxyheptonate aldolase 1)
(DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1) gi|170225|gb|AAA34068.1|
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
gi|228697|prf||1808327A deoxyheptulosonate phosphate
synthase
Length = 542
Score = 112 bits (281), Expect(2) = 9e-26
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = -2
Query: 448 GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRIGSEQSL 275
GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR+GS+ L
Sbjct: 483 GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRLGSQNVL 540
Score = 25.4 bits (54), Expect(2) = 9e-26
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 489 KEGXPPSGVHLEMT 448
+EG P GVHLEMT
Sbjct: 469 QEGSHPGGVHLEMT 482
>sp|P37216|AROG_LYCES Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast
precursor (Phospho-2-keto-3-deoxyheptonate aldolase 2)
(DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 2) gi|542033|pir||S40412
2-dehydro-3-deoxy-phosphoheptonate aldolase (EC
4.1.2.15) 2 precursor - tomato gi|410488|emb|CAA79856.1|
phospho-2-dehydro-3-deoxyheptonate aldolase
[Lycopersicon esculentum]
Length = 541
Score = 112 bits (281), Expect(2) = 9e-26
Identities = 53/58 (91%), Positives = 57/58 (97%)
Frame = -2
Query: 448 GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRIGSEQSL 275
GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERLRKRR+GS+ +L
Sbjct: 482 GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGSQSTL 539
Score = 25.4 bits (54), Expect(2) = 9e-26
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 489 KEGXPPSGVHLEMT 448
+EG P GVHLEMT
Sbjct: 468 QEGSHPGGVHLEMT 481
>sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast
precursor (Phospho-2-keto-3-deoxyheptonate aldolase 1)
(DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1)
Length = 538
Score = 110 bits (276), Expect(2) = 4e-25
Identities = 52/55 (94%), Positives = 55/55 (99%)
Frame = -2
Query: 448 GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRIGSE 284
GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERLRKRR+GS+
Sbjct: 482 GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGSQ 536
Score = 25.4 bits (54), Expect(2) = 4e-25
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 489 KEGXPPSGVHLEMT 448
+EG P GVHLEMT
Sbjct: 468 QEGSHPGGVHLEMT 481
>emb|CAA75386.1| 2-dehydro-3-deoxyphosphoheptonate aldolase;
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
[Morinda citrifolia]
Length = 535
Score = 110 bits (276), Expect(2) = 4e-25
Identities = 52/56 (92%), Positives = 56/56 (99%)
Frame = -2
Query: 448 GQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRIGSEQ 281
GQNVTECIGGSRTVT+DDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR+GS++
Sbjct: 477 GQNVTECIGGSRTVTYDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRMGSQR 532
Score = 25.4 bits (54), Expect(2) = 4e-25
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 489 KEGXPPSGVHLEMT 448
+EG P GVHLEMT
Sbjct: 463 QEGSHPGGVHLEMT 476
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 431,345,088
Number of Sequences: 1393205
Number of extensions: 8650162
Number of successful extensions: 15473
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 15174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15472
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
