Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000992A_C01 KMC000992A_c01
(543 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175713.1| cell division-related protein, putative; protei... 83 2e-15
gb|AAO42182.1| putative cell division-related protein [Arabidops... 83 2e-15
dbj|BAB92215.1| putative CRK1 protein [Oryza sativa (japonica cu... 64 2e-09
ref|NP_174637.1| protein kinase, putative; protein id: At1g33770... 52 4e-06
ref|NP_192739.1| putative protein kinase; protein id: At4g10010.... 50 2e-05
>ref|NP_175713.1| cell division-related protein, putative; protein id: At1g53050.1
[Arabidopsis thaliana] gi|25405618|pir||A96571
hypothetical protein F8L10.9 [imported] - Arabidopsis
thaliana gi|9454540|gb|AAF87863.1|AC022520_7 similar to
cdc2 protein kinase [Arabidopsis thaliana]
Length = 694
Score = 83.2 bits (204), Expect = 2e-15
Identities = 39/54 (72%), Positives = 48/54 (88%)
Frame = -1
Query: 543 DSNLVGYGSKGYGIHYSGPVLVPSHHMDQMLKDHDRPIQEAVRRARLDKAQNEK 382
D L+GYGSKG+ IHYSGP++VPS +MDQ+LKDHDR IQEAVRRAR+DKA+ +K
Sbjct: 619 DPILLGYGSKGHKIHYSGPLVVPSGNMDQVLKDHDRHIQEAVRRARIDKARVKK 672
>gb|AAO42182.1| putative cell division-related protein [Arabidopsis thaliana]
Length = 694
Score = 83.2 bits (204), Expect = 2e-15
Identities = 39/54 (72%), Positives = 48/54 (88%)
Frame = -1
Query: 543 DSNLVGYGSKGYGIHYSGPVLVPSHHMDQMLKDHDRPIQEAVRRARLDKAQNEK 382
D L+GYGSKG+ IHYSGP++VPS +MDQ+LKDHDR IQEAVRRAR+DKA+ +K
Sbjct: 619 DPILLGYGSKGHKIHYSGPLVVPSGNMDQVLKDHDRHIQEAVRRARIDKARVKK 672
>dbj|BAB92215.1| putative CRK1 protein [Oryza sativa (japonica cultivar-group)]
Length = 701
Score = 63.5 bits (153), Expect = 2e-09
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = -1
Query: 531 VGYGSKGYGIHYSGPVLVPSHHMDQMLKDHDRPIQEAVRRARLDKAQ 391
+GYGSKG IH+SGP++ PS ++DQMLK++DR IQE RR R++K++
Sbjct: 615 IGYGSKGNKIHHSGPLICPSGNVDQMLKENDRQIQEVFRRTRVEKSR 661
>ref|NP_174637.1| protein kinase, putative; protein id: At1g33770.1 [Arabidopsis
thaliana] gi|25403201|pir||B86461 probable protein
kinase [imported] - Arabidopsis thaliana
gi|9665093|gb|AAF97284.1|AC010164_6 Putative protein
kinase [Arabidopsis thaliana]
Length = 614
Score = 52.4 bits (124), Expect = 4e-06
Identities = 22/48 (45%), Positives = 36/48 (74%)
Frame = -1
Query: 525 YGSKGYGIHYSGPVLVPSHHMDQMLKDHDRPIQEAVRRARLDKAQNEK 382
Y K +HYSGP++ P +++ M+K+H+R IQEAVR++RL+K+ +K
Sbjct: 557 YMRKKNRMHYSGPLMPPGGNIEDMMKEHERRIQEAVRKSRLEKSATKK 604
>ref|NP_192739.1| putative protein kinase; protein id: At4g10010.1 [Arabidopsis
thaliana] gi|7488162|pir||T04005 probable protein kinase
T5L19.140 (EC 2.7.1.-) - Arabidopsis thaliana
gi|4539004|emb|CAB39625.1| putative protein kinase
[Arabidopsis thaliana] gi|7267697|emb|CAB78124.1|
putative protein kinase [Arabidopsis thaliana]
Length = 649
Score = 50.1 bits (118), Expect = 2e-05
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = -1
Query: 525 YGSKGYGIHYSGPVLVPSHHMDQMLKDHDRPIQEAVRRARLDKAQNEKTS 376
Y K +H SGP++ P +++ +LKDH+R IQEAVR++RL+K+ K +
Sbjct: 595 YVRKKNRMHCSGPLMPPGGNIEDILKDHERQIQEAVRKSRLEKSATRKNN 644
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 472,735,383
Number of Sequences: 1393205
Number of extensions: 10533893
Number of successful extensions: 33912
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 31014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33767
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
