Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000977A_C01 KMC000977A_c01
(546 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL91632.1| AT4g37080/C7A10_280 [Arabidopsis thaliana] gi|234... 195 3e-49
ref|NP_195425.1| putative protein; protein id: At4g37080.1 [Arab... 195 3e-49
ref|NP_199083.1| putative protein; protein id: At5g42690.1 [Arab... 166 1e-40
ref|NP_181499.1| hypothetical protein; protein id: At2g39690.1 [... 109 2e-23
ref|NP_568927.1| putative protein; protein id: At5g60720.1, supp... 103 2e-21
>gb|AAL91632.1| AT4g37080/C7A10_280 [Arabidopsis thaliana]
gi|23463049|gb|AAN33194.1| At4g37080/C7A10_280
[Arabidopsis thaliana]
Length = 597
Score = 195 bits (495), Expect = 3e-49
Identities = 92/121 (76%), Positives = 105/121 (86%)
Frame = -2
Query: 545 FLLGKLASLNLKXLNHQEKLAFWINTYNSCMLNAYLEQGIPESPEMVVALMQKAMIVVGG 366
FLL KL+ +NL L+HQ+KLAFWINTYNSC++NA+LE GIP +PEMVVALMQKA I+VGG
Sbjct: 378 FLLNKLSVVNLDGLSHQQKLAFWINTYNSCVMNAFLEHGIPATPEMVVALMQKATIIVGG 437
Query: 365 QLLNAITIEHFILRLPYHLKFTCP*AAKNEEVKARSIFGLEWSEPLVTFELSCGIWSSPA 186
LNAITIEHFILRLPYHLKFTCP A +EE++A S FGLEWSEPLVTF L+CG WSSPA
Sbjct: 438 HSLNAITIEHFILRLPYHLKFTCPKTATHEEMRAHSTFGLEWSEPLVTFALACGSWSSPA 497
Query: 185 V 183
V
Sbjct: 498 V 498
>ref|NP_195425.1| putative protein; protein id: At4g37080.1 [Arabidopsis thaliana]
gi|25407787|pir||A85438 hypothetical protein AT4g37080
[imported] - Arabidopsis thaliana
gi|4006868|emb|CAB16786.1| putative protein [Arabidopsis
thaliana] gi|7270657|emb|CAB80374.1| putative protein
[Arabidopsis thaliana]
Length = 596
Score = 195 bits (495), Expect = 3e-49
Identities = 92/121 (76%), Positives = 105/121 (86%)
Frame = -2
Query: 545 FLLGKLASLNLKXLNHQEKLAFWINTYNSCMLNAYLEQGIPESPEMVVALMQKAMIVVGG 366
FLL KL+ +NL L+HQ+KLAFWINTYNSC++NA+LE GIP +PEMVVALMQKA I+VGG
Sbjct: 377 FLLNKLSVVNLDGLSHQQKLAFWINTYNSCVMNAFLEHGIPATPEMVVALMQKATIIVGG 436
Query: 365 QLLNAITIEHFILRLPYHLKFTCP*AAKNEEVKARSIFGLEWSEPLVTFELSCGIWSSPA 186
LNAITIEHFILRLPYHLKFTCP A +EE++A S FGLEWSEPLVTF L+CG WSSPA
Sbjct: 437 HSLNAITIEHFILRLPYHLKFTCPKTATHEEMRAHSTFGLEWSEPLVTFALACGSWSSPA 496
Query: 185 V 183
V
Sbjct: 497 V 497
>ref|NP_199083.1| putative protein; protein id: At5g42690.1 [Arabidopsis thaliana]
gi|10177272|dbj|BAB10625.1|
emb|CAB16786.1~gene_id:MJB21.6~strong similarity to
unknown protein [Arabidopsis thaliana]
Length = 512
Score = 166 bits (421), Expect = 1e-40
Identities = 83/120 (69%), Positives = 95/120 (79%)
Frame = -2
Query: 542 LLGKLASLNLKXLNHQEKLAFWINTYNSCMLNAYLEQGIPESPEMVVALMQKAMIVVGGQ 363
LLG+L+ +N++ LN QEKLAFWIN YNSCM+N +LE GIPESP+MV LMQKA I VGG
Sbjct: 295 LLGRLSLVNMQKLNQQEKLAFWINIYNSCMMNGFLEHGIPESPDMVT-LMQKATINVGGH 353
Query: 362 LLNAITIEHFILRLPYHLKFTCP*AAKNEEVKARSIFGLEWSEPLVTFELSCGIWSSPAV 183
LNAITIEHFILRLP+H K+ P +K E+ RS FGLE SEPLVTF LSCG WSSPAV
Sbjct: 354 FLNAITIEHFILRLPHHSKYISPKGSKKNEMAVRSKFGLELSEPLVTFALSCGSWSSPAV 413
>ref|NP_181499.1| hypothetical protein; protein id: At2g39690.1 [Arabidopsis
thaliana] gi|25408643|pir||C84820 hypothetical protein
At2g39690 [imported] - Arabidopsis thaliana
gi|2795807|gb|AAB97123.1| hypothetical protein
[Arabidopsis thaliana]
Length = 503
Score = 109 bits (273), Expect = 2e-23
Identities = 59/131 (45%), Positives = 85/131 (64%)
Frame = -2
Query: 542 LLGKLASLNLKXLNHQEKLAFWINTYNSCMLNAYLEQGIPESPEMVVALMQKAMIVVGGQ 363
L+ KL+ ++L L +++KLAFWIN YN+C+++A+LE G+P S ++ LM KA + VGG
Sbjct: 285 LMEKLSEVDLSFLTYKQKLAFWINIYNACIMHAFLEYGLPSSHNRLLTLMNKASLNVGGI 344
Query: 362 LLNAITIEHFILRLPYHLKFTCP*AAKNEEVKARSIFGLEWSEPLVTFELSCGIWSSPAV 183
+LNA+ IEHF+LR P + + +E R +GL +SEP VTF L G WSSPA
Sbjct: 345 VLNALAIEHFVLRHPCEPEDKD--SLDEKETLLRHTYGLGYSEPNVTFALCRGSWSSPA- 401
Query: 182 CLLYLYLADHM 150
L +Y AD +
Sbjct: 402 --LRVYTADEV 410
>ref|NP_568927.1| putative protein; protein id: At5g60720.1, supported by cDNA:
gi_15983810 [Arabidopsis thaliana]
gi|15983811|gb|AAL10502.1| AT5g60720/mup24_130
[Arabidopsis thaliana] gi|27363288|gb|AAO11563.1|
At5g60720/mup24_130 [Arabidopsis thaliana]
Length = 645
Score = 103 bits (256), Expect = 2e-21
Identities = 53/121 (43%), Positives = 84/121 (68%), Gaps = 1/121 (0%)
Frame = -2
Query: 542 LLGKLASLNLKXLNHQEKLAFWINTYNSCMLNAYLEQGIPESPEMVVALM-QKAMIVVGG 366
L+ L +++LK L+HQ+KLAFWIN +N+C+++ YL+ G+P++ E + +L+ KA + VGG
Sbjct: 414 LMNNLETVDLKVLSHQQKLAFWINMFNACVMHGYLQHGVPKTAERLQSLVYNKATMNVGG 473
Query: 365 QLLNAITIEHFILRLPYHLKFTCP*AAKNEEVKARSIFGLEWSEPLVTFELSCGIWSSPA 186
+ ++A TIEH ILR T ++EE+ R ++G+E ++P +TF LSCG SSPA
Sbjct: 474 KNISAHTIEHCILRKSTSSTMT---QDRHEEMIIRKLYGVEATDPNITFALSCGTRSSPA 530
Query: 185 V 183
V
Sbjct: 531 V 531
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 451,688,436
Number of Sequences: 1393205
Number of extensions: 8949256
Number of successful extensions: 17797
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 17384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17775
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
