Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000921A_C01 KMC000921A_c01
(707 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196746.2| MAP3K delta-1 protein kinase; protein id: At5g1... 129 3e-29
pir||T52626 probable mitogen-activated protein kinase MAP3K delt... 129 3e-29
gb|AAF99762.1|AC003981_12 F22O13.20 [Arabidopsis thaliana] 118 9e-26
pir||T06576 probable protein kinase TCTR2 - tomato gi|3201541|em... 116 3e-25
emb|CAC67797.1| TCTR2 protein [Lycopersicon esculentum] 116 3e-25
>ref|NP_196746.2| MAP3K delta-1 protein kinase; protein id: At5g11850.1, supported by
cDNA: gi_18700074 [Arabidopsis thaliana]
gi|18700075|gb|AAL77650.1| AT5g11850/F14F18_20
[Arabidopsis thaliana]
Length = 880
Score = 129 bits (325), Expect = 3e-29
Identities = 58/72 (80%), Positives = 66/72 (91%)
Frame = -1
Query: 707 FGVILWELITTKIPWKGLNPMQVVGAVGFQNKRLEIPEDVDPVVAQIIRDCWQTEPHLRP 528
FGVILWEL T+++PWKGLNPMQVVGAVGFQN+RLEIP+D+D VAQIIR+CWQTEPHLRP
Sbjct: 793 FGVILWELATSRVPWKGLNPMQVVGAVGFQNRRLEIPDDIDLTVAQIIRECWQTEPHLRP 852
Query: 527 SFSQLMSRLYRL 492
SF+QLM L RL
Sbjct: 853 SFTQLMQSLKRL 864
>pir||T52626 probable mitogen-activated protein kinase MAP3K delta-1 [imported]
- Arabidopsis thaliana (fragment)
gi|2253010|emb|CAA74591.1| MAP3K delta-1 protein kinase
[Arabidopsis thaliana]
Length = 406
Score = 129 bits (325), Expect = 3e-29
Identities = 58/72 (80%), Positives = 66/72 (91%)
Frame = -1
Query: 707 FGVILWELITTKIPWKGLNPMQVVGAVGFQNKRLEIPEDVDPVVAQIIRDCWQTEPHLRP 528
FGVILWEL T+++PWKGLNPMQVVGAVGFQN+RLEIP+D+D VAQIIR+CWQTEPHLRP
Sbjct: 319 FGVILWELATSRVPWKGLNPMQVVGAVGFQNRRLEIPDDIDLTVAQIIRECWQTEPHLRP 378
Query: 527 SFSQLMSRLYRL 492
SF+QLM L RL
Sbjct: 379 SFTQLMQSLKRL 390
>gb|AAF99762.1|AC003981_12 F22O13.20 [Arabidopsis thaliana]
Length = 2651
Score = 118 bits (295), Expect = 9e-26
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = -1
Query: 707 FGVILWELITTKIPWKGLNPMQVVGAVGFQNKRLEIPEDVDPVVAQIIRDCWQTEPHLRP 528
FGVILWEL T ++PW+G+NPMQVVGAVGFQN+RLEIP+++DPVV +II +CWQT+P+LRP
Sbjct: 963 FGVILWELATLRLPWRGMNPMQVVGAVGFQNRRLEIPKELDPVVGRIILECWQTDPNLRP 1022
Query: 527 SFSQLMSRLYRLVQHGRPQN 468
SF+QL L L + G P N
Sbjct: 1023 SFAQLTEVLKPLNRLGTPVN 1042
>pir||T06576 probable protein kinase TCTR2 - tomato gi|3201541|emb|CAA06334.1|
TCTR2 protein [Lycopersicon esculentum]
Length = 982
Score = 116 bits (290), Expect = 3e-25
Identities = 53/76 (69%), Positives = 67/76 (87%), Gaps = 3/76 (3%)
Frame = -1
Query: 707 FGVILWELITTKIPWKGLNPMQVVGAVGFQNKRLEIPEDVDPVVAQIIRDCWQTEPHLRP 528
FGVILWEL T ++PW G+NPMQVVGAVGFQNKRLEIP+++DP+VA+II +CWQT+P+LRP
Sbjct: 885 FGVILWELATLRLPWSGMNPMQVVGAVGFQNKRLEIPKELDPIVARIIWECWQTDPNLRP 944
Query: 527 SFSQL---MSRLYRLV 489
SF+QL ++ L RLV
Sbjct: 945 SFAQLTVALTPLQRLV 960
>emb|CAC67797.1| TCTR2 protein [Lycopersicon esculentum]
Length = 982
Score = 116 bits (290), Expect = 3e-25
Identities = 53/76 (69%), Positives = 67/76 (87%), Gaps = 3/76 (3%)
Frame = -1
Query: 707 FGVILWELITTKIPWKGLNPMQVVGAVGFQNKRLEIPEDVDPVVAQIIRDCWQTEPHLRP 528
FGVILWEL T ++PW G+NPMQVVGAVGFQNKRLEIP+++DP+VA+II +CWQT+P+LRP
Sbjct: 885 FGVILWELATLRLPWSGMNPMQVVGAVGFQNKRLEIPKELDPIVARIIWECWQTDPNLRP 944
Query: 527 SFSQL---MSRLYRLV 489
SF+QL ++ L RLV
Sbjct: 945 SFAQLTVALTPLQRLV 960
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 622,240,353
Number of Sequences: 1393205
Number of extensions: 14090438
Number of successful extensions: 43804
Number of sequences better than 10.0: 1855
Number of HSP's better than 10.0 without gapping: 39315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42455
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32373034405
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
