Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000869A_C01 KMC000869A_c01
(511 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T05006 hypothetical protein T19P19.80 - Arabidopsis thalian... 82 3e-15
ref|NP_568066.1| putative protein; protein id: At4g39690.1, supp... 82 3e-15
ref|NP_441448.1| unknown protein [Synechocystis sp. PCC 6803] gi... 32 5.5
gb|AAF14016.1|M81158_1 MAL activator protein [Saccharomyces past... 31 9.5
gb|EAA08537.1| agCP2448 [Anopheles gambiae str. PEST] 31 9.5
>pir||T05006 hypothetical protein T19P19.80 - Arabidopsis thaliana
gi|3080438|emb|CAA18755.1| putative protein [Arabidopsis
thaliana] gi|7270953|emb|CAB80632.1| putative protein
[Arabidopsis thaliana]
Length = 693
Score = 82.4 bits (202), Expect = 3e-15
Identities = 41/61 (67%), Positives = 53/61 (86%)
Frame = -2
Query: 507 KVESYLAEGKLADAAAFLEESVRGTEAAEIVAAWVKQARNRAISEQAVVLLQSYANSLSH 328
KV++YLAEGKLA+AAA LEE V+G++A EIV+ WV++ARNRAI+EQA+ LLQSYA +S
Sbjct: 633 KVDNYLAEGKLAEAAATLEEGVKGSKAEEIVSDWVRRARNRAITEQALTLLQSYATCVSL 692
Query: 327 T 325
T
Sbjct: 693 T 693
>ref|NP_568066.1| putative protein; protein id: At4g39690.1, supported by cDNA:
gi_13605658 [Arabidopsis thaliana]
gi|13605659|gb|AAK32823.1|AF361810_1 AT4g39690/T19P19_80
[Arabidopsis thaliana] gi|21700889|gb|AAM70568.1|
AT4g39690/T19P19_80 [Arabidopsis thaliana]
gi|23397147|gb|AAN31857.1| unknown protein [Arabidopsis
thaliana]
Length = 650
Score = 82.4 bits (202), Expect = 3e-15
Identities = 41/61 (67%), Positives = 53/61 (86%)
Frame = -2
Query: 507 KVESYLAEGKLADAAAFLEESVRGTEAAEIVAAWVKQARNRAISEQAVVLLQSYANSLSH 328
KV++YLAEGKLA+AAA LEE V+G++A EIV+ WV++ARNRAI+EQA+ LLQSYA +S
Sbjct: 590 KVDNYLAEGKLAEAAATLEEGVKGSKAEEIVSDWVRRARNRAITEQALTLLQSYATCVSL 649
Query: 327 T 325
T
Sbjct: 650 T 650
>ref|NP_441448.1| unknown protein [Synechocystis sp. PCC 6803] gi|7469934|pir||S75567
hypothetical protein sll0809 - Synechocystis sp. (strain
PCC 6803) gi|1653212|dbj|BAA18128.1|
ORF_ID:sll0809~unknown protein [Synechocystis sp. PCC
6803]
Length = 223
Score = 31.6 bits (70), Expect = 5.5
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 98 SLISLQSKLQNHWSYLDFTNQ*ISAAMKQKGG*LVFLLGSIVQAIPVGIHGGTRQPL 268
SL LQ +HW L + Q + + GG V G + A+ G GG R+ +
Sbjct: 31 SLGYLQKSWPDHWRQLTWQGQSLGLVTRPSGGRAVLHQGGLTYAVVTGATGGKRREI 87
>gb|AAF14016.1|M81158_1 MAL activator protein [Saccharomyces pastorianus]
Length = 470
Score = 30.8 bits (68), Expect = 9.5
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = -1
Query: 484 RKTC*CSSIPRRKCERHRSCRDC------CSLGEASKKQG 383
R++C C + R KC+R++ C C C L KK+G
Sbjct: 5 RQSCDCCRVRRVKCDRNKPCSRCHQRNLNCILSRPLKKRG 44
>gb|EAA08537.1| agCP2448 [Anopheles gambiae str. PEST]
Length = 284
Score = 30.8 bits (68), Expect = 9.5
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +1
Query: 130 PLELLRFHKSINFSCYETKRRLTCFSSRIN------SSGNSRWHPWRNQTTSAILGIKI 288
P +L + + CY++KR L+CF R + ++G W NQ G+K+
Sbjct: 37 PTKLDDYVLNTQSECYKSKRLLSCFKYRFSRYLWSFATGRMNWFASENQAVETTGGLKL 95
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 401,009,779
Number of Sequences: 1393205
Number of extensions: 7566406
Number of successful extensions: 19896
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19896
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
