Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000838A_C01 KMC000838A_c01
(580 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179501.1| putative cadmium-transporting ATPase; protein i... 206 1e-52
gb|AAL84162.1|AF412407_1 putative heavy metal transporter [Arabi... 206 1e-52
pir||T00531 hypothetical protein T20K24.12 - Arabidopsis thaliana 203 1e-51
gb|AAL14248.1| putative heavy-metal transporter [Arabidopsis tha... 190 1e-47
ref|NP_194740.1| cadmium-transporting ATPase-like protein; prote... 190 1e-47
>ref|NP_179501.1| putative cadmium-transporting ATPase; protein id: At2g19110.1,
supported by cDNA: gi_19071217, supported by cDNA:
gi_20466062 [Arabidopsis thaliana]
gi|12229637|sp|O64474|AHM2_ARATH Potential
cadmium/zinc-transporting ATPase 2
gi|25411904|pir||F84572 probable cadmium-transporting
ATPase [imported] - Arabidopsis thaliana
gi|4210504|gb|AAD12041.1| putative cadmium-transporting
ATPase [Arabidopsis thaliana]
gi|11990207|emb|CAC19544.1| putative heavy metal
transporter [Arabidopsis thaliana]
gi|20466063|gb|AAM19954.1| At2g19110/T20K24.12
[Arabidopsis thaliana]
Length = 1172
Score = 206 bits (525), Expect = 1e-52
Identities = 100/151 (66%), Positives = 128/151 (84%)
Frame = +3
Query: 123 QKQEEKKLQKSYFDVLGLCCSSEVPLIESILKPLEGINEVSVIVPSRTLIVVHDSLIISQ 302
+K++ KKLQKSYFDVLG+CC+SEVP+IE+ILK L+G+ E SVIVPSRT+IVVHDSL+IS
Sbjct: 9 EKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISP 68
Query: 303 LQIVKVLNQARLEANVRVYGNEKHQKRWPRPYSIASGLLLLLSFLKYVYSPLKFLALGAV 482
QI K LN+ARLEANVRV G + +WP P+++ SGLLLLLSFLK+VYSPL++LA+ AV
Sbjct: 69 FQIAKALNEARLEANVRVNGETSFKNKWPSPFAVVSGLLLLLSFLKFVYSPLRWLAVAAV 128
Query: 483 AVGIYPIILKSFASLRNAILDIHILMIIAVI 575
A GIYPI+ K+FAS++ +DI+IL+II VI
Sbjct: 129 AAGIYPILAKAFASIKRPRIDINILVIITVI 159
>gb|AAL84162.1|AF412407_1 putative heavy metal transporter [Arabidopsis thaliana]
Length = 1172
Score = 206 bits (525), Expect = 1e-52
Identities = 100/151 (66%), Positives = 128/151 (84%)
Frame = +3
Query: 123 QKQEEKKLQKSYFDVLGLCCSSEVPLIESILKPLEGINEVSVIVPSRTLIVVHDSLIISQ 302
+K++ KKLQKSYFDVLG+CC+SEVP+IE+ILK L+G+ E SVIVPSRT+IVVHDSL+IS
Sbjct: 9 EKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISP 68
Query: 303 LQIVKVLNQARLEANVRVYGNEKHQKRWPRPYSIASGLLLLLSFLKYVYSPLKFLALGAV 482
QI K LN+ARLEANVRV G + +WP P+++ SGLLLLLSFLK+VYSPL++LA+ AV
Sbjct: 69 FQIAKALNEARLEANVRVNGETSFKNKWPSPFAVVSGLLLLLSFLKFVYSPLRWLAVAAV 128
Query: 483 AVGIYPIILKSFASLRNAILDIHILMIIAVI 575
A GIYPI+ K+FAS++ +DI+IL+II VI
Sbjct: 129 AAGIYPILAKAFASIKRPRIDINILVIITVI 159
>pir||T00531 hypothetical protein T20K24.12 - Arabidopsis thaliana
Length = 182
Score = 203 bits (517), Expect = 1e-51
Identities = 98/148 (66%), Positives = 126/148 (84%)
Frame = +3
Query: 123 QKQEEKKLQKSYFDVLGLCCSSEVPLIESILKPLEGINEVSVIVPSRTLIVVHDSLIISQ 302
+K++ KKLQKSYFDVLG+CC+SEVP+IE+ILK L+G+ E SVIVPSRT+IVVHDSL+IS
Sbjct: 9 EKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISP 68
Query: 303 LQIVKVLNQARLEANVRVYGNEKHQKRWPRPYSIASGLLLLLSFLKYVYSPLKFLALGAV 482
QI K LN+ARLEANVRV G + +WP P+++ SGLLLLLSFLK+VYSPL++LA+ AV
Sbjct: 69 FQIAKALNEARLEANVRVNGETSFKNKWPSPFAVVSGLLLLLSFLKFVYSPLRWLAVAAV 128
Query: 483 AVGIYPIILKSFASLRNAILDIHILMII 566
A GIYPI+ K+FAS++ +DI+IL+II
Sbjct: 129 AAGIYPILAKAFASIKRPRIDINILVII 156
>gb|AAL14248.1| putative heavy-metal transporter [Arabidopsis thaliana]
Length = 951
Score = 190 bits (483), Expect = 1e-47
Identities = 90/145 (62%), Positives = 118/145 (81%)
Frame = +3
Query: 138 KKLQKSYFDVLGLCCSSEVPLIESILKPLEGINEVSVIVPSRTLIVVHDSLIISQLQIVK 317
KK+ KSYFDVLG+CC+SEVPLIE+IL ++G+ E SVIVPSRT+IVVHD+LI+SQ QIVK
Sbjct: 4 KKMTKSYFDVLGICCTSEVPLIENILNSMDGVKEFSVIVPSRTVIVVHDTLILSQFQIVK 63
Query: 318 VLNQARLEANVRVYGNEKHQKRWPRPYSIASGLLLLLSFLKYVYSPLKFLALGAVAVGIY 497
LNQA+LEANVRV G + +WP P+++ SG+LLLLSF KY+YSP ++LA+ AV GIY
Sbjct: 64 ALNQAQLEANVRVTGETNFKNKWPSPFAVVSGILLLLSFFKYLYSPFRWLAVAAVVAGIY 123
Query: 498 PIILKSFASLRNAILDIHILMIIAV 572
PI+ K+ ASL +DI+IL+++ V
Sbjct: 124 PILAKAVASLARFRIDINILVVVTV 148
>ref|NP_194740.1| cadmium-transporting ATPase-like protein; protein id: At4g30110.1,
supported by cDNA: gi_20384832 [Arabidopsis thaliana]
gi|12229675|sp|Q9SZW4|AHM3_ARATH Potential
cadmium/zinc-transporting ATPase 3
gi|7488066|pir||T08987 probable cadmium-transporting
ATPase (EC 3.6.1.-) F6G3.140 - Arabidopsis thaliana
gi|4938487|emb|CAB43846.1| cadmium-transporting
ATPase-like protein [Arabidopsis thaliana]
gi|7269911|emb|CAB81004.1| cadmium-transporting
ATPase-like protein [Arabidopsis thaliana]
Length = 951
Score = 190 bits (483), Expect = 1e-47
Identities = 90/145 (62%), Positives = 118/145 (81%)
Frame = +3
Query: 138 KKLQKSYFDVLGLCCSSEVPLIESILKPLEGINEVSVIVPSRTLIVVHDSLIISQLQIVK 317
KK+ KSYFDVLG+CC+SEVPLIE+IL ++G+ E SVIVPSRT+IVVHD+LI+SQ QIVK
Sbjct: 4 KKMTKSYFDVLGICCTSEVPLIENILNSMDGVKEFSVIVPSRTVIVVHDTLILSQFQIVK 63
Query: 318 VLNQARLEANVRVYGNEKHQKRWPRPYSIASGLLLLLSFLKYVYSPLKFLALGAVAVGIY 497
LNQA+LEANVRV G + +WP P+++ SG+LLLLSF KY+YSP ++LA+ AV GIY
Sbjct: 64 ALNQAQLEANVRVTGETNFKNKWPSPFAVVSGILLLLSFFKYLYSPFRWLAVAAVVAGIY 123
Query: 498 PIILKSFASLRNAILDIHILMIIAV 572
PI+ K+ ASL +DI+IL+++ V
Sbjct: 124 PILAKAVASLARFRIDINILVVVTV 148
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 477,125,366
Number of Sequences: 1393205
Number of extensions: 9847600
Number of successful extensions: 48786
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 42389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48180
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
