Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000830A_C01 KMC000830A_c01
(861 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO59488.1| ser-thr protein kinase [Gossypium hirsutum] 180 3e-44
dbj|BAA92973.1| unnamed protein product [Oryza sativa (japonica ... 138 9e-32
ref|NP_191164.1| putative protein kinase; protein id: At3g56050.... 133 4e-30
dbj|BAB93321.1| putative receptor protein kinase-like protein [O... 132 7e-30
ref|NP_200662.1| putative protein; protein id: At5g58540.1 [Arab... 128 1e-28
>gb|AAO59488.1| ser-thr protein kinase [Gossypium hirsutum]
Length = 328
Score = 180 bits (456), Expect = 3e-44
Identities = 88/155 (56%), Positives = 119/155 (76%), Gaps = 3/155 (1%)
Frame = -1
Query: 861 TDDYAAKISDLSILNEIVSAKTKSGSRKHSDMTLA---SNVYSFGVVLFEMVTGKLPYSV 691
T+DYAAKISD S LN +AK S + + + A SNVYSFGV+LFEM+TG++PYS+
Sbjct: 175 TEDYAAKISDFSFLNNATAAKVGSATMELLESPSADAESNVYSFGVILFEMITGRIPYSI 234
Query: 690 ENSGSLNDWASHFLHGDRPLKEITDPTLVSFQEEQLDQVSELIQSCVNPDPEQRPTMKEV 511
+NS SL DWAS +L D+PLKE+ DPTL FQ + L+++ E++++CVNPDP++RPTM+EV
Sbjct: 235 DNS-SLADWASDYLKRDQPLKEMVDPTLKFFQGDDLEKLFEVVKTCVNPDPKERPTMREV 293
Query: 510 SLRLREITKIRPEAAVPKLSPLWWAELEISSFDAS 406
+ +L+EIT + P+ A PKLSPLWWAELEI S + S
Sbjct: 294 AAKLKEITAMGPDGATPKLSPLWWAELEILSTEPS 328
>dbj|BAA92973.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|20804456|dbj|BAB92152.1|
ATF28A21_5(AL035526|pid:g4539383) Arabidopsis thaliana
chromosome 4 BAC clone F28A21 ; putative protein
(fragment) . [Oryza sativa (japonica cultivar-group)]
Length = 677
Score = 138 bits (348), Expect = 9e-32
Identities = 70/156 (44%), Positives = 103/156 (65%), Gaps = 4/156 (2%)
Frame = -1
Query: 861 TDDYAAKISDLSILNEIV----SAKTKSGSRKHSDMTLASNVYSFGVVLFEMVTGKLPYS 694
TDDYAAKI+D+ I E+ +AK S SR +ASNVY FG +L E+++GKLP
Sbjct: 524 TDDYAAKIADVGIWKEVAIKAKTAKEDSSSRSECPPDIASNVYCFGTLLIEIISGKLP-E 582
Query: 693 VENSGSLNDWASHFLHGDRPLKEITDPTLVSFQEEQLDQVSELIQSCVNPDPEQRPTMKE 514
++ S+ +WA+ +L G + ++ D +L +L+ V E+IQ C++PD +QRPTM++
Sbjct: 583 ADDQKSMCNWAAEYLKG-KSYSKLVDASLKEHNANELEAVCEVIQECIDPDSDQRPTMRD 641
Query: 513 VSLRLREITKIRPEAAVPKLSPLWWAELEISSFDAS 406
+ +LR+ I PEAA P+LSPLWWAELEI S +A+
Sbjct: 642 ATRKLRQALNISPEAATPRLSPLWWAELEILSAEAT 677
>ref|NP_191164.1| putative protein kinase; protein id: At3g56050.1, supported by
cDNA: gi_15028142, supported by cDNA: gi_20259276,
supported by cDNA: gi_20466709 [Arabidopsis thaliana]
gi|11358664|pir||T47722 probable protein kinase -
Arabidopsis thaliana gi|7572903|emb|CAB87404.1| putative
protein kinase [Arabidopsis thaliana]
gi|15028143|gb|AAK76695.1| putative protein kinase
[Arabidopsis thaliana] gi|20259277|gb|AAM14374.1|
putative protein kinase [Arabidopsis thaliana]
gi|20466710|gb|AAM20672.1| putative protein kinase
[Arabidopsis thaliana] gi|23198240|gb|AAN15647.1|
putative protein kinase [Arabidopsis thaliana]
gi|24417418|gb|AAN60319.1| unknown [Arabidopsis
thaliana]
Length = 499
Score = 133 bits (334), Expect = 4e-30
Identities = 70/153 (45%), Positives = 105/153 (67%), Gaps = 5/153 (3%)
Frame = -1
Query: 861 TDDYAAKISDLSILNEIVSAKTKSGSR-----KHSDMTLASNVYSFGVVLFEMVTGKLPY 697
T+DYA KI+D + ++T+S + S+ T NV+SFG++LFE++TGKLP
Sbjct: 347 TEDYAVKIADFNFGYLKGPSETESSTNALIDTNISETTQEDNVHSFGLLLFELMTGKLPE 406
Query: 696 SVENSGSLNDWASHFLHGDRPLKEITDPTLVSFQEEQLDQVSELIQSCVNPDPEQRPTMK 517
SV+ S++ + FL G + L+E+ DPT+ SF +E+++ + E+I+SC+ D +QRP MK
Sbjct: 407 SVQKGDSIDTGLAVFLRG-KTLREMVDPTIESF-DEKIENIGEVIKSCIRADAKQRPIMK 464
Query: 516 EVSLRLREITKIRPEAAVPKLSPLWWAELEISS 418
EV+ RLREIT + P+ +PKLSPLWWAELE+ S
Sbjct: 465 EVTGRLREITGLSPDDTIPKLSPLWWAELEVLS 497
>dbj|BAB93321.1| putative receptor protein kinase-like protein [Oryza sativa
(japonica cultivar-group)] gi|21644631|dbj|BAC01190.1|
putative receptor protein kinase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 668
Score = 132 bits (332), Expect = 7e-30
Identities = 70/161 (43%), Positives = 106/161 (65%), Gaps = 9/161 (5%)
Frame = -1
Query: 861 TDDYAAKISDLSILNEIVSAKTKSGSRKHSDMT---------LASNVYSFGVVLFEMVTG 709
++D AAK++D+S+ E++S K K+ D+ A NV SFG+++ E+++G
Sbjct: 512 SEDGAAKVADMSVWQEVIS---KGKMPKNDDIVDHHEPVSADPAGNVCSFGLLMLEIISG 568
Query: 708 KLPYSVENSGSLNDWASHFLHGDRPLKEITDPTLVSFQEEQLDQVSELIQSCVNPDPEQR 529
+ PYS E+ GSL + A + DR + + DPTL + +E +L+ + ELIQ C+ DP++R
Sbjct: 569 RPPYS-EHKGSLANLAMECIKDDRNISCLLDPTLKTHKENELEIICELIQECIQSDPKKR 627
Query: 528 PTMKEVSLRLREITKIRPEAAVPKLSPLWWAELEISSFDAS 406
P M+EV+ RLRE+ I PEAA P+LSPLWWAELEI S +A+
Sbjct: 628 PGMREVTTRLREVLAISPEAATPRLSPLWWAELEILSVEAT 668
>ref|NP_200662.1| putative protein; protein id: At5g58540.1 [Arabidopsis thaliana]
Length = 421
Score = 128 bits (321), Expect = 1e-28
Identities = 68/155 (43%), Positives = 103/155 (65%), Gaps = 3/155 (1%)
Frame = -1
Query: 861 TDDYAAKISDLSILNEIVSAKTKSGSRKHSDMTLA---SNVYSFGVVLFEMVTGKLPYSV 691
T+D AAK+SD S++N I +K S S+ + +L +NV++FG VLFE+++GKLP
Sbjct: 278 TEDNAAKVSDFSVINSIFPSKEGSSSKNLLEPSLLDPHTNVFNFGAVLFEIISGKLP--- 334
Query: 690 ENSGSLNDWASHFLHGDRPLKEITDPTLVSFQEEQLDQVSELIQSCVNPDPEQRPTMKEV 511
D S L +P ++I DPTL +FQE ++++ E+++ C+NP +QRPTM+EV
Sbjct: 335 -------DPDSMLLE-PKPTRDIVDPTLKTFQENVVERLLEVVRQCLNPYSDQRPTMREV 386
Query: 510 SLRLREITKIRPEAAVPKLSPLWWAELEISSFDAS 406
++LREIT I +AA+P+LSP WW ELEI S + +
Sbjct: 387 VVKLREITGIEADAAMPRLSPRWWTELEIISTEGN 421
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 699,667,177
Number of Sequences: 1393205
Number of extensions: 15382061
Number of successful extensions: 45467
Number of sequences better than 10.0: 2532
Number of HSP's better than 10.0 without gapping: 42552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44281
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 45709790868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
