Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000827A_C02 KMC000827A_c02
(679 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN05336.1| Putative leucine-rich repeat transmembrane protei... 182 5e-45
gb|AAK18840.1|AC082645_10 putative receptor kinase [Oryza sativa] 168 5e-41
ref|NP_180241.1| leucine-rich repeat transmembrane protein kinas... 144 1e-33
gb|AAK92807.1| putative receptor protein kinase [Arabidopsis tha... 144 1e-33
ref|NP_566589.1| leucine-rich repeat transmembrane protein kinas... 140 1e-32
>gb|AAN05336.1| Putative leucine-rich repeat transmembrane protein kinase [Oryza
sativa (japonica cultivar-group)]
Length = 675
Score = 182 bits (461), Expect = 5e-45
Identities = 88/109 (80%), Positives = 102/109 (92%)
Frame = -1
Query: 679 EVTDLRKVSQKADVYSFGVLLLELLTGKAPTHTLLNEEGVDLPRWVQSVVKEEWSSEVFD 500
EVTD+R+VSQKADVYSFGVLLLELLTGKAPTH ++NEEG+DLPRWVQSVV+EEW++EVFD
Sbjct: 550 EVTDIRRVSQKADVYSFGVLLLELLTGKAPTHAVVNEEGLDLPRWVQSVVREEWTAEVFD 609
Query: 499 LELLRDQNVEEEMVQLLQLAVDCAAPYPDNRPSMSEVRQQIEELRRSSL 353
ELLR QNVEEEMVQLLQLA+DC+A +PD RPSMSEV +I+E+RRSSL
Sbjct: 610 QELLRYQNVEEEMVQLLQLAIDCSAQHPDRRPSMSEVAARIDEIRRSSL 658
>gb|AAK18840.1|AC082645_10 putative receptor kinase [Oryza sativa]
Length = 686
Score = 168 bits (426), Expect = 5e-41
Identities = 86/119 (72%), Positives = 101/119 (84%), Gaps = 1/119 (0%)
Frame = -1
Query: 679 EVTDLRKVSQKADVYSFGVLLLELLTGKAPTHTLLNEEGVDLPRWVQSVVKEEWSSEVFD 500
EVTD R+VSQKADVYSFGVLLLELLTGKAP+ LN+EGVDLPRWVQSVV+ EW++EVFD
Sbjct: 543 EVTDPRRVSQKADVYSFGVLLLELLTGKAPSQAALNDEGVDLPRWVQSVVRSEWTAEVFD 602
Query: 499 LELLRDQNVEEEMVQLLQLAVDCAAPYPDNRPSMSEVRQQIEELRRSSLK-EGQDQIQQ 326
+ELLR QNVEE+MVQLLQLA+DC A PD RPSM V +IEE+++SS + EG+D QQ
Sbjct: 603 MELLRYQNVEEQMVQLLQLAIDCVAQVPDARPSMPHVVLRIEEIKKSSERLEGRDPQQQ 661
>ref|NP_180241.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At2g26730.1, supported by cDNA: gi_15292872
[Arabidopsis thaliana] gi|25407845|pir||B84664 probable
receptor-like protein kinase [imported] - Arabidopsis
thaliana gi|2760839|gb|AAB95307.1| putative
receptor-like protein kinase [Arabidopsis thaliana]
Length = 658
Score = 144 bits (362), Expect = 1e-33
Identities = 69/107 (64%), Positives = 86/107 (79%)
Frame = -1
Query: 679 EVTDLRKVSQKADVYSFGVLLLELLTGKAPTHTLLNEEGVDLPRWVQSVVKEEWSSEVFD 500
EV + RKV+ K+DVYSFGVLLLELLTGK+P L EEG+DLPRWV SVV+EEW++EVFD
Sbjct: 516 EVLETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFD 575
Query: 499 LELLRDQNVEEEMVQLLQLAVDCAAPYPDNRPSMSEVRQQIEELRRS 359
+EL+R N+EEEMVQLLQ+A+ C + PD RP M EV + IE++ RS
Sbjct: 576 VELMRYHNIEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDVNRS 622
>gb|AAK92807.1| putative receptor protein kinase [Arabidopsis thaliana]
Length = 658
Score = 144 bits (362), Expect = 1e-33
Identities = 69/107 (64%), Positives = 86/107 (79%)
Frame = -1
Query: 679 EVTDLRKVSQKADVYSFGVLLLELLTGKAPTHTLLNEEGVDLPRWVQSVVKEEWSSEVFD 500
EV + RKV+ K+DVYSFGVLLLELLTGK+P L EEG+DLPRWV SVV+EEW++EVFD
Sbjct: 516 EVLETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFD 575
Query: 499 LELLRDQNVEEEMVQLLQLAVDCAAPYPDNRPSMSEVRQQIEELRRS 359
+EL+R N+EEEMVQLLQ+A+ C + PD RP M EV + IE++ RS
Sbjct: 576 VELMRYHNIEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDVNRS 622
>ref|NP_566589.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g17840.1, supported by cDNA: 22221., supported by
cDNA: gi_20465260 [Arabidopsis thaliana]
gi|9294488|dbj|BAB02707.1| probable receptor-like
protein kinase protein [Arabidopsis thaliana]
gi|20465261|gb|AAM19950.1| AT3g17840/MEB5_6 [Arabidopsis
thaliana] gi|25090409|gb|AAN72294.1| At3g17840/MEB5_6
[Arabidopsis thaliana]
Length = 647
Score = 140 bits (354), Expect = 1e-32
Identities = 69/110 (62%), Positives = 90/110 (81%), Gaps = 3/110 (2%)
Frame = -1
Query: 679 EVTDLRKVSQKADVYSFGVLLLELLTGKAPTHTLLNEEGVDLPRWVQSVVKEEWSSEVFD 500
EVTD R+VSQKADVYSFGV+LLELLTGKAP+++++NEEG+DL RWV SV +EEW +EVFD
Sbjct: 532 EVTDPRRVSQKADVYSFGVVLLELLTGKAPSNSVMNEEGMDLARWVHSVAREEWRNEVFD 591
Query: 499 LELLRDQ---NVEEEMVQLLQLAVDCAAPYPDNRPSMSEVRQQIEELRRS 359
EL+ + +VEEEM ++LQL +DC +PD RP M EV ++I+ELR+S
Sbjct: 592 SELMSIETVVSVEEEMAEMLQLGIDCTEQHPDKRPVMVEVVRRIQELRQS 641
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 584,216,444
Number of Sequences: 1393205
Number of extensions: 12645418
Number of successful extensions: 45827
Number of sequences better than 10.0: 2316
Number of HSP's better than 10.0 without gapping: 41695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44588
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29987172312
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
