Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000817A_C01 KMC000817A_c01
(756 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL32300.1|AF321984_1 lethal leaf spot 1-like protein [Lycope... 229 4e-59
gb|AAK98735.1|AC090485_14 Putative cell death suppressor protein... 221 1e-56
gb|AAC49676.1| lethal leaf-spot 1 [Zea mays] 220 2e-56
pir||T04136 cell death suppressor protein lls1 - maize 211 7e-54
gb|AAC49679.1| lethal leaf-spot 1 homolog [Arabidopsis thaliana] 211 1e-53
>gb|AAL32300.1|AF321984_1 lethal leaf spot 1-like protein [Lycopersicon esculentum]
Length = 537
Score = 229 bits (583), Expect = 4e-59
Identities = 107/152 (70%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
Frame = -2
Query: 755 EKIFLSETEEGG-DINKVYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGKTNKQKLP 579
EK+FLS+++E G D+NK YT +TFTPTQADRFVLAFRNWLRRHGN QPEWFG T+ Q LP
Sbjct: 386 EKVFLSKSKENGTDVNKEYTKLTFTPTQADRFVLAFRNWLRRHGNSQPEWFGSTDNQPLP 445
Query: 578 STVLSKREMLDRFEQHTLVCSSCKGAYEGFQTWQKILIGATVVFCATSGIPSDTQLRILL 399
STVLSKR+M+DRFEQHTL CSSCK AY F+ QK+LIG+ VV CA++GIP+D LRI+L
Sbjct: 446 STVLSKRQMMDRFEQHTLKCSSCKKAYYTFEKLQKLLIGSVVVCCASAGIPADVNLRIIL 505
Query: 398 AGLGILSAGLAFAINQLQKNFVFVDYVHADID 303
L I+SAGLA+ +++LQKNF+FVDYVHA+ID
Sbjct: 506 GSLAIISAGLAYILHELQKNFIFVDYVHAEID 537
>gb|AAK98735.1|AC090485_14 Putative cell death suppressor protein [Oryza sativa]
Length = 515
Score = 221 bits (562), Expect = 1e-56
Identities = 106/152 (69%), Positives = 125/152 (81%), Gaps = 1/152 (0%)
Frame = -2
Query: 755 EKIFLSETEEGG-DINKVYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGKTNKQKLP 579
EKIFLS ++E DIN+ YT ITFTPTQADRFVLAFR WLR+ GN QP+WFG +++ LP
Sbjct: 364 EKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRAWLRKFGNSQPDWFGNPSQEVLP 423
Query: 578 STVLSKREMLDRFEQHTLVCSSCKGAYEGFQTWQKILIGATVVFCATSGIPSDTQLRILL 399
STVLSKREMLDR+EQHTL CSSCKGAY FQT QK+ +GATV FCAT+GIP+D Q R+LL
Sbjct: 424 STVLSKREMLDRYEQHTLKCSSCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFRLLL 483
Query: 398 AGLGILSAGLAFAINQLQKNFVFVDYVHADID 303
A ++SA +A+A LQKNFVFVDYVHA+ID
Sbjct: 484 AAAALVSAAVAYAFYTLQKNFVFVDYVHAEID 515
>gb|AAC49676.1| lethal leaf-spot 1 [Zea mays]
Length = 467
Score = 220 bits (560), Expect = 2e-56
Identities = 105/152 (69%), Positives = 123/152 (80%), Gaps = 1/152 (0%)
Frame = -2
Query: 755 EKIFLSETEEGG-DINKVYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGKTNKQKLP 579
EKIFL+ T+E DIN+ YT ITFTPTQADRFVLAFR WLR+ GN QPEWFG ++ LP
Sbjct: 316 EKIFLAATKESSTDINQQYTKITFTPTQADRFVLAFRTWLRKFGNSQPEWFGNPTQEALP 375
Query: 578 STVLSKREMLDRFEQHTLVCSSCKGAYEGFQTWQKILIGATVVFCATSGIPSDTQLRILL 399
STVLSKREMLDR+EQHTL CSSCKGAY FQ QK+ +GATVV CA +GIP D QLR+L+
Sbjct: 376 STVLSKREMLDRYEQHTLKCSSCKGAYNAFQNLQKVFMGATVVCCAAAGIPPDVQLRLLI 435
Query: 398 AGLGILSAGLAFAINQLQKNFVFVDYVHADID 303
++SA +A+A ++LQKNFVFVDYVHADID
Sbjct: 436 GAAALVSAAVAYAFHELQKNFVFVDYVHADID 467
>pir||T04136 cell death suppressor protein lls1 - maize
Length = 520
Score = 211 bits (538), Expect = 7e-54
Identities = 102/152 (67%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
Frame = -2
Query: 755 EKIFLSETEEGG-DINKVYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGKTNKQKLP 579
EKIFL+ T+E DIN+ YT ITFTPTQADRFVLA R WLR+ GN QPEWFG ++ LP
Sbjct: 369 EKIFLAATKESSTDINQQYTKITFTPTQADRFVLACRTWLRKFGNSQPEWFGNPTQEALP 428
Query: 578 STVLSKREMLDRFEQHTLVCSSCKGAYEGFQTWQKILIGATVVFCATSGIPSDTQLRILL 399
STVLSKREMLDR+EQ +L CSSCKGAY FQ QK+ +GATVV CA +GIP D QLR+L+
Sbjct: 429 STVLSKREMLDRYEQLSLKCSSCKGAYNAFQNLQKVFMGATVVCCAAAGIPPDVQLRLLI 488
Query: 398 AGLGILSAGLAFAINQLQKNFVFVDYVHADID 303
++SA +A+A ++LQKNFVFVDYVHADID
Sbjct: 489 GAAALVSAAIAYAFHELQKNFVFVDYVHADID 520
>gb|AAC49679.1| lethal leaf-spot 1 homolog [Arabidopsis thaliana]
Length = 539
Score = 211 bits (536), Expect = 1e-53
Identities = 99/154 (64%), Positives = 127/154 (82%), Gaps = 3/154 (1%)
Frame = -2
Query: 755 EKIFLSETEEGGD--INKVYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGKT-NKQK 585
EK+FL+++ E D +NK YT +TFTPTQADRFVLAFRNWLRRHG QPEWFG T + Q
Sbjct: 386 EKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRHGKSQPEWFGSTPSNQP 445
Query: 584 LPSTVLSKREMLDRFEQHTLVCSSCKGAYEGFQTWQKILIGATVVFCATSGIPSDTQLRI 405
LPSTVL+KR+MLDRF+QHT VCSSCKGAY FQ +K L+GATV + AT+G+PSD Q+R+
Sbjct: 446 LPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIRL 505
Query: 404 LLAGLGILSAGLAFAINQLQKNFVFVDYVHADID 303
+LAGL ++SA A+A+++ +KNFVF DYVH++I+
Sbjct: 506 VLAGLSLISAASAYALHEQEKNFVFRDYVHSEIE 539
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 666,330,900
Number of Sequences: 1393205
Number of extensions: 15200047
Number of successful extensions: 44198
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 42093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43963
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36877108757
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
