Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000816A_C02 KMC000816A_c02
(505 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201261.1| putative protein; protein id: At5g64560.1, supp... 92 4e-18
ref|NP_196531.1| putative protein; protein id: At5g09690.1 [Arab... 87 1e-16
gb|AAN73217.1| MRS2-7 [Arabidopsis thaliana] 87 1e-16
emb|CAC13982.1| putative magnesium transporter [Arabidopsis thal... 68 7e-11
gb|AAN73218.1| MRS2-8 [Arabidopsis thaliana] 58 7e-08
>ref|NP_201261.1| putative protein; protein id: At5g64560.1, supported by cDNA:
106187., supported by cDNA: gi_17529325, supported by
cDNA: gi_20465370 [Arabidopsis thaliana]
gi|10178059|dbj|BAB11423.1| contains similarity to
unknown protein~emb|CAB89361.1~gene_id:MUB3.8
[Arabidopsis thaliana] gi|17529326|gb|AAL38890.1|
unknown protein [Arabidopsis thaliana]
gi|20465371|gb|AAM20089.1| unknown protein [Arabidopsis
thaliana] gi|21536628|gb|AAM60960.1| putative magnesium
transporter [Arabidopsis thaliana]
gi|25360813|gb|AAN73212.1| MRS2-2 [Arabidopsis thaliana]
Length = 394
Score = 91.7 bits (226), Expect = 4e-18
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = -1
Query: 403 LELFLRSGTVSLSICSLVAAIFGMNIPYTWREGHGYIFKWVVIFAGMVCASLFLSIAAYA 224
LEL L SGTV LS+ SLVA IFGMNIPYTW +GHGY+FK+VV G +C +F+ I +YA
Sbjct: 327 LELVLSSGTVCLSMYSLVAGIFGMNIPYTWNDGHGYMFKYVVGLTGTLCVVVFVIIMSYA 386
Query: 223 RRQGLVGS 200
R +GLVGS
Sbjct: 387 RYKGLVGS 394
>ref|NP_196531.1| putative protein; protein id: At5g09690.1 [Arabidopsis thaliana]
gi|11282359|pir||T49929 hypothetical protein F17I14.120
- Arabidopsis thaliana gi|7671420|emb|CAB89361.1|
putative protein [Arabidopsis thaliana]
Length = 401
Score = 87.0 bits (214), Expect = 1e-16
Identities = 40/68 (58%), Positives = 49/68 (71%)
Frame = -1
Query: 403 LELFLRSGTVSLSICSLVAAIFGMNIPYTWREGHGYIFKWVVIFAGMVCASLFLSIAAYA 224
LEL L +GTV +S+ S++A IFGMNIP TW HGYIFKWVV G C LF+ I +YA
Sbjct: 334 LELMLSAGTVCVSVYSMIAGIFGMNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYA 393
Query: 223 RRQGLVGS 200
R +GL+GS
Sbjct: 394 RFRGLIGS 401
>gb|AAN73217.1| MRS2-7 [Arabidopsis thaliana]
Length = 386
Score = 87.0 bits (214), Expect = 1e-16
Identities = 40/68 (58%), Positives = 49/68 (71%)
Frame = -1
Query: 403 LELFLRSGTVSLSICSLVAAIFGMNIPYTWREGHGYIFKWVVIFAGMVCASLFLSIAAYA 224
LEL L +GTV +S+ S++A IFGMNIP TW HGYIFKWVV G C LF+ I +YA
Sbjct: 319 LELMLSAGTVCVSVYSMIAGIFGMNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYA 378
Query: 223 RRQGLVGS 200
R +GL+GS
Sbjct: 379 RFRGLIGS 386
>emb|CAC13982.1| putative magnesium transporter [Arabidopsis thaliana]
Length = 378
Score = 67.8 bits (164), Expect = 7e-11
Identities = 31/41 (75%), Positives = 35/41 (84%)
Frame = -1
Query: 403 LELFLRSGTVSLSICSLVAAIFGMNIPYTWREGHGYIFKWV 281
LEL L SGTV LS+ SLVA IFGMNIPYTW +GHGY+FK+V
Sbjct: 327 LELVLSSGTVCLSMYSLVAGIFGMNIPYTWNDGHGYMFKYV 367
>gb|AAN73218.1| MRS2-8 [Arabidopsis thaliana]
Length = 380
Score = 57.8 bits (138), Expect = 7e-08
Identities = 28/66 (42%), Positives = 43/66 (64%)
Frame = -1
Query: 400 ELFLRSGTVSLSICSLVAAIFGMNIPYTWREGHGYIFKWVVIFAGMVCASLFLSIAAYAR 221
E+ L +G++ +S+ S+V I GMNIP+ W ++FKWVV VCA LF++I ++AR
Sbjct: 315 EIILTAGSICVSVYSVVVGILGMNIPFPWNI-KKHMFKWVVSGTATVCAILFVTIMSFAR 373
Query: 220 RQGLVG 203
+ L G
Sbjct: 374 YKKLFG 379
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 464,812,023
Number of Sequences: 1393205
Number of extensions: 10362457
Number of successful extensions: 24522
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 23925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24511
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
