Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000793A_C01 KMC000793A_c01
(529 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06783 ent-kaurene synthase A (EC 2.5.1.-) - garden pea gi|... 153 1e-36
dbj|BAA95612.1| copalyl diphosphate [Croton sublyratus] 117 1e-25
dbj|BAA84918.1| copalyl diphosphate synthase [Lycopersicon escul... 115 3e-25
dbj|BAB12440.1| copalyldiphosphate synthase No1 [Lactuca sativa] 112 2e-24
dbj|BAB03594.1| copalyl diphosphate [Scoparia dulcis] 110 1e-23
>pir||T06783 ent-kaurene synthase A (EC 2.5.1.-) - garden pea
gi|2160544|gb|AAB58822.1| ent-kaurene synthase A [Pisum
sativum]
Length = 801
Score = 153 bits (386), Expect = 1e-36
Identities = 76/121 (62%), Positives = 91/121 (74%), Gaps = 4/121 (3%)
Frame = -1
Query: 529 AELLVQTINLSAGYWISEEQMLSPQYQRLLQLTNTLCHTLHCYQKGKEFKN----DNIIT 362
AELL+Q INL + +WISE + Q LLQLTN++CH L CYQK KE K +NI
Sbjct: 681 AELLIQIINLCSNHWISEGPSMQSTIQHLLQLTNSICHKLSCYQKDKELKGISCQENITN 740
Query: 361 LEVESEMQELVQLVFQKSSTGIDFNIKNTSFTVAKSFYYKAFCDSGTINFHIAQVLFDEV 182
EVES+MQELVQ+VFQK IDFN+KNT FT+AKSFYY AFCDS TINFHIA+VLF++V
Sbjct: 741 SEVESKMQELVQMVFQKCPNDIDFNVKNTFFTIAKSFYYAAFCDSRTINFHIAKVLFEKV 800
Query: 181 L 179
+
Sbjct: 801 V 801
>dbj|BAA95612.1| copalyl diphosphate [Croton sublyratus]
Length = 829
Score = 117 bits (292), Expect = 1e-25
Identities = 60/117 (51%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = -1
Query: 529 AELLVQTINLSAGYWISEEQM-LSPQYQRLLQLTNTLCHTLHCYQKGKEFKNDNIITLEV 353
AEL+V+TINL+ G W+SEE + + +Y++L QL+N L H L + K K T E+
Sbjct: 712 AELIVKTINLTTGPWVSEELLNCNSKYEKLFQLSNYLYHQLGHFNKNKVDDKKKYTTPEI 771
Query: 352 ESEMQELVQLVFQKSSTGIDFNIKNTSFTVAKSFYYKAFCDSGTINFHIAQVLFDEV 182
ES MQEL QLV Q SS G+D NIK T FTV KS YY CD GT N+H+++VLF+ V
Sbjct: 772 ESSMQELAQLVLQNSSDGLDSNIKQTFFTVVKSIYYTTVCDLGTTNYHMSKVLFERV 828
>dbj|BAA84918.1| copalyl diphosphate synthase [Lycopersicon esculentum]
Length = 800
Score = 115 bits (288), Expect = 3e-25
Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 4/121 (3%)
Frame = -1
Query: 529 AELLVQTINLSAGYWISEEQMLS-PQYQRLLQLTNTLCHTLHCYQKGKEFKNDNIITL-- 359
AEL+++T+NL + +WISEE +LS P YQ+LL++TN + H L Y KG K ++T
Sbjct: 681 AELIIRTLNLCSVHWISEEILLSHPTYQKLLEITNRVSHRLRLY-KGHSEKQVGMLTFSE 739
Query: 358 EVESEMQELVQLVFQKSSTG-IDFNIKNTSFTVAKSFYYKAFCDSGTINFHIAQVLFDEV 182
E+E +MQ+L +LV S +D NIK+T TVAKSFYY A+CD TINFHIA+VLF+ V
Sbjct: 740 EIEGDMQQLAELVLSHSDASELDANIKDTFLTVAKSFYYSAYCDDRTINFHIAKVLFERV 799
Query: 181 L 179
+
Sbjct: 800 V 800
>dbj|BAB12440.1| copalyldiphosphate synthase No1 [Lactuca sativa]
Length = 799
Score = 112 bits (281), Expect = 2e-24
Identities = 54/117 (46%), Positives = 80/117 (68%)
Frame = -1
Query: 529 AELLVQTINLSAGYWISEEQMLSPQYQRLLQLTNTLCHTLHCYQKGKEFKNDNIITLEVE 350
AEL+VQTIN++AG W+S E + PQY+ L + N +CH ++ + E N I+ ++
Sbjct: 684 AELIVQTINMTAGRWVSNELLAHPQYRLLSSVINNICHEIYHNRTCMEV-NSTTISTSID 742
Query: 349 SEMQELVQLVFQKSSTGIDFNIKNTSFTVAKSFYYKAFCDSGTINFHIAQVLFDEVL 179
S+MQELVQLV S +D ++K T TVAK+FYYKA+CD TIN HI++V+F+ ++
Sbjct: 743 SKMQELVQLVLSDSLDDLDQDLKQTFLTVAKTFYYKAYCDPETINVHISKVMFETII 799
>dbj|BAB03594.1| copalyl diphosphate [Scoparia dulcis]
Length = 827
Score = 110 bits (274), Expect = 1e-23
Identities = 62/129 (48%), Positives = 86/129 (66%), Gaps = 12/129 (9%)
Frame = -1
Query: 529 AELLVQTINL--SAGYWISEEQMLS-PQYQRLLQLTNTLCHTLHCYQK--------GKEF 383
AELLV+T+NL G W+SEE +LS P+YQ LL++TN +CH L +Q+ G
Sbjct: 699 AELLVRTLNLCGGGGRWVSEELLLSHPKYQHLLEVTNRVCHQLRLFQRRQACDVNGGCMT 758
Query: 382 KNDNIITLEVESEMQELVQLVFQKSSTG-IDFNIKNTSFTVAKSFYYKAFCDSGTINFHI 206
I++ ++ES MQEL +LV KSS+G +D + K TVA+SFYY +C+ G+INFHI
Sbjct: 759 DVGGILSAQIESNMQELAKLVPTKSSSGDLDSDTKQNFLTVARSFYYAVYCNPGSINFHI 818
Query: 205 AQVLFDEVL 179
A+VLF+ VL
Sbjct: 819 AKVLFERVL 827
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,758,087
Number of Sequences: 1393205
Number of extensions: 8853115
Number of successful extensions: 20578
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 20061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20553
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
