Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000788A_C01 KMC000788A_c01
(523 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176860.1| protein kinase, putative; protein id: At1g66880... 81 6e-15
pir||E96692 probable wall-associated kinase T4O24.5 [imported] -... 81 6e-15
gb|AAN60342.1| unknown [Arabidopsis thaliana] 80 1e-14
dbj|BAB11288.1| contains similarity to protein kinase~gene_id:MX... 74 8e-13
ref|NP_198637.2| protein kinase - like protein; protein id: At5g... 74 8e-13
>ref|NP_176860.1| protein kinase, putative; protein id: At1g66880.1 [Arabidopsis
thaliana] gi|12597754|gb|AAG60067.1|AC013288_1 protein
kinase, putative [Arabidopsis thaliana]
Length = 1286
Score = 81.3 bits (199), Expect = 6e-15
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Frame = -1
Query: 523 EKDDGVRRMMTGVAELAFRCLPQQKEMRPHMDEAVEILRAIKSDELDPREAKVVDVVT-- 350
+ D VRR M VAELAFRCL Q++++RP MDE VEILR IK DE K DVV
Sbjct: 1192 DNDPEVRRKMMAVAELAFRCLQQERDVRPAMDEIVEILRGIKDDEKKRVLVKSPDVVDIE 1251
Query: 349 ----DEVVLLK-KVPSPVSPDSVADKWVSSSTASNSL 254
D+V LL+ VP P+SP++ DKW SSS + SL
Sbjct: 1252 CGGGDDVGLLRNSVPPPISPET--DKWTSSSDTAASL 1286
>pir||E96692 probable wall-associated kinase T4O24.5 [imported] - Arabidopsis
thaliana gi|12320923|gb|AAG50588.1|AC083891_2
wall-associated kinase, putative [Arabidopsis thaliana]
Length = 907
Score = 81.3 bits (199), Expect = 6e-15
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Frame = -1
Query: 523 EKDDGVRRMMTGVAELAFRCLPQQKEMRPHMDEAVEILRAIKSDELDPREAKVVDVVT-- 350
+ D VRR M VAELAFRCL Q++++RP MDE VEILR IK DE K DVV
Sbjct: 813 DNDPEVRRKMMAVAELAFRCLQQERDVRPAMDEIVEILRGIKDDEKKRVLVKSPDVVDIE 872
Query: 349 ----DEVVLLK-KVPSPVSPDSVADKWVSSSTASNSL 254
D+V LL+ VP P+SP++ DKW SSS + SL
Sbjct: 873 CGGGDDVGLLRNSVPPPISPET--DKWTSSSDTAASL 907
>gb|AAN60342.1| unknown [Arabidopsis thaliana]
Length = 663
Score = 80.1 bits (196), Expect = 1e-14
Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Frame = -1
Query: 523 EKDDGVRRMMTGVAELAFRCLPQQKEMRPHMDEAVEILRAIKSDELDPREAKVVDVVT-- 350
+ D VRR M V+ELAFRCL Q++++RP MDE VEILR IK DE K DVV
Sbjct: 569 DNDPEVRRKMMAVSELAFRCLQQERDVRPAMDEIVEILRGIKDDEKKRVLVKSPDVVDIE 628
Query: 349 ----DEVVLLK-KVPSPVSPDSVADKWVSSSTASNSL 254
D+V LL+ VP P+SP++ DKW SSS + SL
Sbjct: 629 CGGGDDVGLLRNSVPPPISPET--DKWTSSSDTAASL 663
>dbj|BAB11288.1| contains similarity to protein kinase~gene_id:MXA21.10 [Arabidopsis
thaliana]
Length = 978
Score = 74.3 bits (181), Expect = 8e-13
Identities = 41/92 (44%), Positives = 62/92 (66%), Gaps = 4/92 (4%)
Frame = -1
Query: 520 KDDGVRRMMTGVAELAFRCLPQQKEMRPHMDEAVEILRAIKSDELDPREAKVVDVVT--- 350
+D V++MM+ VAELAFRCL Q++++RP MDE VE+LR I+ D + + VV++
Sbjct: 886 RDPSVKKMMSSVAELAFRCLQQERDVRPSMDEIVEVLRVIQKDGISDSKDVVVEIDVNGG 945
Query: 349 DEVVLLKK-VPSPVSPDSVADKWVSSSTASNS 257
D+V LLK VP P+SP++ SS+T ++S
Sbjct: 946 DDVGLLKHGVPPPLSPETDKTTASSSNTTASS 977
>ref|NP_198637.2| protein kinase - like protein; protein id: At5g38210.1, supported
by cDNA: gi_18175790 [Arabidopsis thaliana]
gi|18175791|gb|AAL59928.1| putative protein kinase
[Arabidopsis thaliana] gi|22136902|gb|AAM91795.1|
putative protein kinase [Arabidopsis thaliana]
Length = 686
Score = 74.3 bits (181), Expect = 8e-13
Identities = 41/92 (44%), Positives = 62/92 (66%), Gaps = 4/92 (4%)
Frame = -1
Query: 520 KDDGVRRMMTGVAELAFRCLPQQKEMRPHMDEAVEILRAIKSDELDPREAKVVDVVT--- 350
+D V++MM+ VAELAFRCL Q++++RP MDE VE+LR I+ D + + VV++
Sbjct: 594 RDPSVKKMMSSVAELAFRCLQQERDVRPSMDEIVEVLRVIQKDGISDSKDVVVEIDVNGG 653
Query: 349 DEVVLLKK-VPSPVSPDSVADKWVSSSTASNS 257
D+V LLK VP P+SP++ SS+T ++S
Sbjct: 654 DDVGLLKHGVPPPLSPETDKTTASSSNTTASS 685
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,966,069
Number of Sequences: 1393205
Number of extensions: 9939108
Number of successful extensions: 30269
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 28392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30048
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
