Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000782A_C01 KMC000782A_c01
(694 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA65500.1| protein kinase [Medicago sativa] 125 7e-28
pir||T08874 calcium-dependent protein kinase (EC 2.7.1.-) gamma ... 123 3e-27
pir||T01989 calcium-dependent protein kinase (EC 2.7.1.-) 1 - co... 96 5e-19
emb|CAC87494.1| calcium-dependent protein kinase [Lycopersicon e... 91 2e-17
pir||T10938 calcium-dependent protein kinase (EC 2.7.1.-) - swee... 91 2e-17
>emb|CAA65500.1| protein kinase [Medicago sativa]
Length = 542
Score = 125 bits (313), Expect = 7e-28
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = -3
Query: 530 FITRDELEIAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQQQ 351
FITRDELE AMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQQQ
Sbjct: 479 FITRDELETAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQQQ 538
Query: 350 GKVF 339
K+F
Sbjct: 539 VKLF 542
>pir||T08874 calcium-dependent protein kinase (EC 2.7.1.-) gamma - soybean
gi|2501766|gb|AAB80693.1| calmodulin-like domain protein
kinase isoenzyme gamma [Glycine max]
Length = 538
Score = 123 bits (308), Expect = 3e-27
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = -3
Query: 530 FITRDELEIAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQQQ 351
FITRDELE AMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEF AMM+SGNQQQ
Sbjct: 475 FITRDELESAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFSAMMKSGNQQQ 534
Query: 350 GKVF 339
GK+F
Sbjct: 535 GKLF 538
>pir||T01989 calcium-dependent protein kinase (EC 2.7.1.-) 1 - common tobacco
gi|3283996|gb|AAC25423.1| calcium-dependent protein
kinase [Nicotiana tabacum]
Length = 540
Score = 95.9 bits (237), Expect = 5e-19
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = -3
Query: 530 FITRDELEIAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQQQ 351
FITRDELE AMKEYGMGD+ATIKEII+EVDT D+DGRINYEEFCAMMRSG Q Q
Sbjct: 484 FITRDELESAMKEYGMGDEATIKEIIAEVDT-------DNDGRINYEEFCAMMRSGTQPQ 536
Query: 350 GKVF 339
K+F
Sbjct: 537 PKLF 540
>emb|CAC87494.1| calcium-dependent protein kinase [Lycopersicon esculentum]
Length = 553
Score = 90.9 bits (224), Expect = 2e-17
Identities = 49/65 (75%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Frame = -3
Query: 530 FITRDELEIAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSG-NQQ 354
FITRDELE AMKEYGMGD+ATIKE II+EVDTD+DGRINYEEFCAMMRSG Q
Sbjct: 496 FITRDELENAMKEYGMGDEATIKE-------IIAEVDTDNDGRINYEEFCAMMRSGTTQP 548
Query: 353 QGKVF 339
Q K+F
Sbjct: 549 QQKLF 553
>pir||T10938 calcium-dependent protein kinase (EC 2.7.1.-) - sweet potato
gi|1552214|dbj|BAA13440.1| calcium dependent protein
kinase [Ipomoea batatas]
Length = 514
Score = 90.9 bits (224), Expect = 2e-17
Identities = 46/64 (71%), Positives = 50/64 (77%)
Frame = -3
Query: 530 FITRDELEIAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQQQ 351
FITRDELE AMKE+G+ D ATIKEIISEVD DHDGRINYEEFC MMRSG +QQ
Sbjct: 458 FITRDELETAMKEHGIADAATIKEIISEVDA-------DHDGRINYEEFCTMMRSGTKQQ 510
Query: 350 GKVF 339
K+F
Sbjct: 511 AKLF 514
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 587,175,459
Number of Sequences: 1393205
Number of extensions: 12264786
Number of successful extensions: 27925
Number of sequences better than 10.0: 603
Number of HSP's better than 10.0 without gapping: 26542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27831
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31401661572
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
