Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000773A_C02 KMC000773A_c02
(574 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB70837.1| glutathione reductase (NADPH) [Vitis vinifera] 94 9e-19
sp|P27456|GSHC_PEA Glutathione reductase, chloroplast/mitochondr... 94 2e-18
pir||S18973 glutathione-disulfide reductase (EC 1.8.1.7) - garde... 94 2e-18
sp|P48640|GSHC_SOYBN Glutathione reductase, chloroplast precurso... 92 5e-18
gb|AAF26175.1|AF105199_1 glutathione reductase [Glycine max] 92 6e-18
>gb|AAB70837.1| glutathione reductase (NADPH) [Vitis vinifera]
Length = 565
Score = 94.4 bits (233), Expect = 9e-19
Identities = 45/56 (80%), Positives = 50/56 (88%)
Frame = -3
Query: 572 VAIKAGLKKADFDSTIGIHPTAAEEFVTMRTPTRKIRKSQPSEGKSDSEVKAAAGV 405
VA++AGL KADFD+T+GIHPTAAEE VTMRTPTRKIR S P EGK+D EVKAAAGV
Sbjct: 510 VAVRAGLTKADFDATVGIHPTAAEELVTMRTPTRKIRNSSPPEGKTDPEVKAAAGV 565
>sp|P27456|GSHC_PEA Glutathione reductase, chloroplast/mitochondrial precursor (GR)
(GRase) (GOR1) gi|975704|emb|CAA62482.1| glutathione
reductase (NADPH) [Pisum sativum]
Length = 552
Score = 93.6 bits (231), Expect = 2e-18
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = -3
Query: 572 VAIKAGLKKADFDSTIGIHPTAAEEFVTMRTPTRKIRKSQPSEGKSDSEVKAAAG 408
V IKAGL KADFD+T+GIHPTAAEEFVTMRTPTRK+RK+Q S+GKSDS+ KA AG
Sbjct: 497 VGIKAGLTKADFDATVGIHPTAAEEFVTMRTPTRKVRKNQASQGKSDSKAKAVAG 551
>pir||S18973 glutathione-disulfide reductase (EC 1.8.1.7) - garden pea
gi|1345568|emb|CAA42921.1| glutathione reductase (NADPH)
[Pisum sativum]
Length = 562
Score = 93.6 bits (231), Expect = 2e-18
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = -3
Query: 572 VAIKAGLKKADFDSTIGIHPTAAEEFVTMRTPTRKIRKSQPSEGKSDSEVKAAAG 408
V IKAGL KADFD+T+GIHPTAAEEFVTMRTPTRK+RK+Q S+GKSDS+ KA AG
Sbjct: 507 VGIKAGLTKADFDATVGIHPTAAEEFVTMRTPTRKVRKNQASQGKSDSKAKAVAG 561
>sp|P48640|GSHC_SOYBN Glutathione reductase, chloroplast precursor (GR) (GRase)
gi|7431852|pir||T07155 glutathione-disulfide reductase
(EC 1.8.1.7) - soybean gi|169965|gb|AAA33962.1|
glutathione reductase
Length = 544
Score = 92.0 bits (227), Expect = 5e-18
Identities = 45/56 (80%), Positives = 51/56 (90%)
Frame = -3
Query: 572 VAIKAGLKKADFDSTIGIHPTAAEEFVTMRTPTRKIRKSQPSEGKSDSEVKAAAGV 405
VA+KA L KADFD+T+GIHP+AAEEFVTMRTPTRKIRKS+ SEGKS S+ KAAAGV
Sbjct: 489 VALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKIRKSESSEGKSGSQAKAAAGV 544
>gb|AAF26175.1|AF105199_1 glutathione reductase [Glycine max]
Length = 545
Score = 91.7 bits (226), Expect = 6e-18
Identities = 45/56 (80%), Positives = 50/56 (88%)
Frame = -3
Query: 572 VAIKAGLKKADFDSTIGIHPTAAEEFVTMRTPTRKIRKSQPSEGKSDSEVKAAAGV 405
VA+KA L KADFD+T+GIHP+AAEEFVTMRTPTRKIRKS+ SEGKS SE K AAGV
Sbjct: 490 VALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKIRKSESSEGKSGSEAKTAAGV 545
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,565,322
Number of Sequences: 1393205
Number of extensions: 9694265
Number of successful extensions: 16938
Number of sequences better than 10.0: 210
Number of HSP's better than 10.0 without gapping: 16574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16933
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
