Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000767A_C01 KMC000767A_c01
(625 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S55344 outer envelope membrane protein OEP75 precursor - ga... 158 6e-38
ref|NP_190258.1| chloroplast import-associated channel protein h... 150 1e-35
ref|NP_192647.1| outer envelope membrane protein OEP75 precursor... 148 5e-35
ref|NP_174821.1| hypothetical protein; protein id: At1g35860.1 [... 92 7e-18
ref|NP_488933.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 51 1e-05
>pir||S55344 outer envelope membrane protein OEP75 precursor - garden pea
gi|576507|gb|AAA53275.1| outer membrane protein
gi|633607|emb|CAA58720.1| chloroplastic outer envelope
membrane protein (OEP75) [Pisum sativum]
Length = 809
Score = 158 bits (399), Expect = 6e-38
Identities = 74/84 (88%), Positives = 80/84 (95%)
Frame = -3
Query: 623 RNILELAAELRVPVKGTHVYAFAEHGNDLGSSKNVKGNPTEVYRRMGHGSSYGVGVKLGL 444
RNILELAAE+R+P+KGTHVYAFAEHG DLGSSK+VKGNPT VYRRMG GSSYG G+KLGL
Sbjct: 726 RNILELAAEIRIPIKGTHVYAFAEHGTDLGSSKDVKGNPTVVYRRMGQGSSYGAGMKLGL 785
Query: 443 VRAEYAVDHNSGTGALFFRFGERF 372
VRAEYAVDHNSGTGA+FFRFGERF
Sbjct: 786 VRAEYAVDHNSGTGAVFFRFGERF 809
>ref|NP_190258.1| chloroplast import-associated channel protein homolog; protein id:
At3g46740.1 [Arabidopsis thaliana]
gi|7487986|pir||T12975 outer envelope membrane protein
homolog T6H20.230 - Arabidopsis thaliana
gi|5541685|emb|CAB51191.1| chloroplast import-associated
channel homolog [Arabidopsis thaliana]
gi|22022564|gb|AAM83239.1| AT3g46740/T6H20_230
[Arabidopsis thaliana]
Length = 818
Score = 150 bits (379), Expect = 1e-35
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = -3
Query: 623 RNILELAAELRVPVKGTHVYAFAEHGNDLGSSKNVKGNPTEVYRRMGHGSSYGVGVKLGL 444
RNI E+ AE+R+PVK THVYAF EHGNDLGSSK+VKGNPT VYRR G GSSYG GVKLGL
Sbjct: 735 RNIAEVGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQGSSYGAGVKLGL 794
Query: 443 VRAEYAVDHNSGTGALFFRFGERF 372
VRAEYAVDHN+GTGALFFRFGER+
Sbjct: 795 VRAEYAVDHNNGTGALFFRFGERY 818
>ref|NP_192647.1| outer envelope membrane protein OEP75 precursor homolog; protein
id: At4g09080.1 [Arabidopsis thaliana]
gi|25407478|pir||H85091 hypothetical protein AT4g09080
[imported] - Arabidopsis thaliana
gi|7267551|emb|CAB78032.1| outer envelope membrane
protein OEP75 precursor homolog [Arabidopsis thaliana]
Length = 407
Score = 148 bits (374), Expect = 5e-35
Identities = 68/84 (80%), Positives = 77/84 (90%)
Frame = -3
Query: 623 RNILELAAELRVPVKGTHVYAFAEHGNDLGSSKNVKGNPTEVYRRMGHGSSYGVGVKLGL 444
+NILEL AE+R+PVK THVYAFAEHGNDLGSSK+VKGNPT +YR+MGHGSSYG+GVKLG+
Sbjct: 324 KNILELGAEIRIPVKNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVKLGM 383
Query: 443 VRAEYAVDHNSGTGALFFRFGERF 372
VRAEY V HN GTGALF RFGER+
Sbjct: 384 VRAEYTVRHNRGTGALFLRFGERY 407
>ref|NP_174821.1| hypothetical protein; protein id: At1g35860.1 [Arabidopsis
thaliana] gi|25511692|pir||E86480 43.6K hypothetical
protein F10O5.4 - Arabidopsis thaliana
gi|12322088|gb|AAG51082.1|AC027032_2 hypothetical
protein [Arabidopsis thaliana]
Length = 399
Score = 91.7 bits (226), Expect = 7e-18
Identities = 46/61 (75%), Positives = 51/61 (83%), Gaps = 2/61 (3%)
Frame = -3
Query: 623 RNILEL--AAELRVPVKGTHVYAFAEHGNDLGSSKNVKGNPTEVYRRMGHGSSYGVGVKL 450
RNI+EL AELRV VK T YAFAEHGNDLGSSK++KGNPT +RR GHGSSYGVG+KL
Sbjct: 339 RNIVELKVGAELRVNVKNTQGYAFAEHGNDLGSSKDMKGNPTAAFRREGHGSSYGVGMKL 398
Query: 449 G 447
G
Sbjct: 399 G 399
>ref|NP_488933.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25532565|pir||AE2417
hypothetical protein alr4893 [imported] - Nostoc sp.
(strain PCC 7120) gi|17134030|dbj|BAB76592.1|
ORF_ID:alr4893~hypothetical protein [Nostoc sp. PCC
7120]
Length = 676
Score = 50.8 bits (120), Expect = 1e-05
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Frame = -3
Query: 623 RNILELAAELR---VPVKGTHVYAFAEHGNDLGSSKNVKGNPTEVYRRMGHGSSYGVGVK 453
R+ + +AE R VP+ G + FA+ +DLGS V GNP V + G G YG G++
Sbjct: 589 RSYVLASAEYRFPIVPIVGGVL--FADFASDLGSGDTVLGNPAGVRGKPGSGFGYGAGIR 646
Query: 452 ----LGLVRAEYAVDHNSGTGALFFRFGERF 372
LGL+RA+Y + ++ G + G+RF
Sbjct: 647 VDSPLGLIRADYGI-NDQGESRVHLGIGQRF 676
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,189,590
Number of Sequences: 1393205
Number of extensions: 10754868
Number of successful extensions: 23695
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 22971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23677
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25301904073
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
