Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000765A_C01 KMC000765A_c01
(461 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB92228.1| B1075D06.2 [Oryza sativa (japonica cultivar-group)] 40 0.012
ref|NP_197125.2| putative protein; protein id: At5g16210.1, supp... 39 0.026
pir||T51491 hypothetical protein T21H19_130 - Arabidopsis thalia... 39 0.026
ref|NP_704843.1| hypothetical protein [Plasmodium falciparum 3D7... 32 2.4
ref|NP_083914.1| amiloride binding protein 1 (amine oxidase, cop... 30 9.3
>dbj|BAB92228.1| B1075D06.2 [Oryza sativa (japonica cultivar-group)]
Length = 1183
Score = 40.0 bits (92), Expect = 0.012
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 461 RFRRIMLGNFGDMLRGKAKAQEE 393
RF RIMLG FGDMLRGKAK +E
Sbjct: 1159 RFGRIMLGGFGDMLRGKAKGSDE 1181
>ref|NP_197125.2| putative protein; protein id: At5g16210.1, supported by cDNA:
gi_17978918 [Arabidopsis thaliana]
gi|17978919|gb|AAL47427.1| AT5g16210/T21H19_130
[Arabidopsis thaliana]
Length = 1180
Score = 38.9 bits (89), Expect = 0.026
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -1
Query: 461 RFRRIMLGNFGDMLRGKAKAQEEGQ 387
RFRRIM GNF +MLR KAK Q+E Q
Sbjct: 1152 RFRRIMRGNFTEMLRSKAKTQDETQ 1176
>pir||T51491 hypothetical protein T21H19_130 - Arabidopsis thaliana
gi|9755831|emb|CAC01862.1| putative protein [Arabidopsis
thaliana]
Length = 1189
Score = 38.9 bits (89), Expect = 0.026
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -1
Query: 461 RFRRIMLGNFGDMLRGKAKAQEEGQ 387
RFRRIM GNF +MLR KAK Q+E Q
Sbjct: 1161 RFRRIMRGNFTEMLRSKAKTQDETQ 1185
>ref|NP_704843.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23505205|emb|CAD51986.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 4530
Score = 32.3 bits (72), Expect = 2.4
Identities = 24/57 (42%), Positives = 28/57 (49%)
Frame = +1
Query: 151 ENNQNTTKFGIKRFIYMFIFFLRN*SKRIKKCDIYGKQLWLISPNGLSWVVVYWGTN 321
ENN N KF IY FI ++N RIK DIY ++IS N V WG N
Sbjct: 3512 ENNVNNFKF-----IYNFIHDIKN---RIKFIDIYNGSDFIISINNFGHVYA-WGNN 3559
>ref|NP_083914.1| amiloride binding protein 1 (amine oxidase, copper-containing) [Mus
musculus] gi|18257350|gb|AAH21880.1| Similar to
amiloride binding protein [Mus musculus]
Length = 751
Score = 30.4 bits (67), Expect = 9.3
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 33 TIKWSVEHRLVEATKLKEQFTHSYRLSIQISLRFSTQGLGKQSKHNKIWHQKVY-LYVHL 209
T WS H LV+ T + Q++H ++ + + L + N+ H++ Y L +H
Sbjct: 540 TNPWSPSHSLVQPTLEQTQYSHEHQAAFRFGQTLPKYLLFSSPQKNRWGHRRSYRLQIHS 599
Query: 210 LSQKL 224
+++++
Sbjct: 600 MAEQV 604
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,041,469
Number of Sequences: 1393205
Number of extensions: 8175645
Number of successful extensions: 16869
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16865
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11998661767
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
