Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000763A_C01 KMC000763A_c01
(696 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD03456.1| contains similarity to Ipomoea nil leaf protein (... 128 9e-29
ref|NP_192388.1| hypothetical protein; protein id: At4g04790.1 [... 128 9e-29
ref|NP_193919.1| putative protein; protein id: At4g21880.1 [Arab... 84 1e-15
ref|NP_171976.1| hypothetical protein; protein id: At1g04840.1 [... 40 0.024
sp|Q9H7B2|U170_HUMAN Hypothetical protein FLJ21087 gi|10437105|d... 38 0.15
>gb|AAD03456.1| contains similarity to Ipomoea nil leaf protein (GB: D85101)
[Arabidopsis thaliana]
Length = 760
Score = 128 bits (321), Expect = 9e-29
Identities = 66/143 (46%), Positives = 91/143 (63%)
Frame = -2
Query: 674 IPLEVLFDSVFSVIASSQSTHLPFGLDLLWAIKDEIGLIPSRQSLDFLLSACAHAGDLNN 495
IP+E FD VF IA ++ + + G+DLL +KDE+G +PSR+ LDFLL AC +A DL +
Sbjct: 603 IPVEAHFDEVFWAIAETEPSKVHLGMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLEH 662
Query: 494 ARLIWREYEVAGFPYHVLSYLRMYQALLASGDHRSAHLMLQKIPKDDMEVCSVILSCPNT 315
L+W+EY+ A FP +VLS+LRMYQ LLA+GD A ++ KIPKDD +V +I +
Sbjct: 663 GLLVWKEYQSAAFPCNVLSFLRMYQVLLAAGDSEGAKALVSKIPKDDKDVQHIIEESQSA 722
Query: 314 YSANDHLNSVEVKKPKGKKKKKK 246
+S + P KK KKK
Sbjct: 723 FS----------QAPNKKKPKKK 735
>ref|NP_192388.1| hypothetical protein; protein id: At4g04790.1 [Arabidopsis
thaliana] gi|25407292|pir||C85060 hypothetical protein
AT4g04790 [imported] - Arabidopsis thaliana
gi|7267237|emb|CAB80844.1| hypothetical protein
[Arabidopsis thaliana]
Length = 731
Score = 128 bits (321), Expect = 9e-29
Identities = 66/143 (46%), Positives = 91/143 (63%)
Frame = -2
Query: 674 IPLEVLFDSVFSVIASSQSTHLPFGLDLLWAIKDEIGLIPSRQSLDFLLSACAHAGDLNN 495
IP+E FD VF IA ++ + + G+DLL +KDE+G +PSR+ LDFLL AC +A DL +
Sbjct: 574 IPVEAHFDEVFWAIAETEPSKVHLGMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLEH 633
Query: 494 ARLIWREYEVAGFPYHVLSYLRMYQALLASGDHRSAHLMLQKIPKDDMEVCSVILSCPNT 315
L+W+EY+ A FP +VLS+LRMYQ LLA+GD A ++ KIPKDD +V +I +
Sbjct: 634 GLLVWKEYQSAAFPCNVLSFLRMYQVLLAAGDSEGAKALVSKIPKDDKDVQHIIEESQSA 693
Query: 314 YSANDHLNSVEVKKPKGKKKKKK 246
+S + P KK KKK
Sbjct: 694 FS----------QAPNKKKPKKK 706
>ref|NP_193919.1| putative protein; protein id: At4g21880.1 [Arabidopsis thaliana]
gi|7487835|pir||T05470 hypothetical protein T8O5.90 -
Arabidopsis thaliana gi|2894566|emb|CAA17155.1| putative
protein [Arabidopsis thaliana]
gi|7269033|emb|CAB79143.1| putative protein [Arabidopsis
thaliana]
Length = 859
Score = 84.3 bits (207), Expect = 1e-15
Identities = 39/84 (46%), Positives = 59/84 (69%)
Frame = -2
Query: 680 DEIPLEVLFDSVFSVIASSQSTHLPFGLDLLWAIKDEIGLIPSRQSLDFLLSACAHAGDL 501
D++ +E F+ VF IA ++S+ + GLDL+ +K+E+ L PSR+ LDFLL AC +A D
Sbjct: 683 DDVGVEYWFEEVFKSIAETESSDVKVGLDLVSFMKEELELCPSRKCLDFLLHACVNAKDK 742
Query: 500 NNARLIWREYEVAGFPYHVLSYLR 429
+A L+W EY+ A PY+V++YLR
Sbjct: 743 QSALLVWEEYQCAELPYNVINYLR 766
>ref|NP_171976.1| hypothetical protein; protein id: At1g04840.1 [Arabidopsis
thaliana] gi|25346323|pir||F86181 protein F13M7.17
[imported] - Arabidopsis thaliana
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17
[Arabidopsis thaliana]
Length = 665
Score = 40.4 bits (93), Expect = 0.024
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Frame = -2
Query: 683 SDEIPLEVLFDSVFSVIASSQSTHLPFGLDLLWAIKDEIGLIPSRQSLDFLLSACAHAGD 504
S E P EV+F +V + +S L GL+ +++ + + P+ + ++ AG
Sbjct: 388 SGEKPDEVVFLAVLTACLNSSEVDL--GLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGK 445
Query: 503 LNNARLIWREYEVAGFPYH--VLSYLRMYQALLASGDHRSAHLMLQKIPKDDMEVCSVIL 330
LN A + V P + + ++ +Y+A A +R A + Q + + D E+C +
Sbjct: 446 LNEAHEL-----VENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYI 500
Query: 329 SCPNTYSANDHLNSVEVKKPKGKKKKKKK 243
T+++ ++ VE ++ +K+ K++
Sbjct: 501 FLDKTHASKGNIQDVEKRRLSLQKRIKER 529
>sp|Q9H7B2|U170_HUMAN Hypothetical protein FLJ21087 gi|10437105|dbj|BAB14983.1| unnamed
protein product [Homo sapiens]
Length = 253
Score = 37.7 bits (86), Expect = 0.15
Identities = 31/112 (27%), Positives = 49/112 (43%)
Frame = -2
Query: 575 DEIGLIPSRQSLDFLLSACAHAGDLNNARLIWREYEVAGFPYHVLSYLRMYQALLASGDH 396
D+ + + L LL ++N RL EY + + Y R Y+ LL
Sbjct: 148 DDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAGLEYVLHFTALNGKIYFRSYKLLLKKSGC 207
Query: 395 RSAHLMLQKIPKDDMEVCSVILSCPNTYSANDHLNSVEVKKPKGKKKKKKKK 240
R+ + L+++ S+ L T+ A+D L + +K PK K KKKKK
Sbjct: 208 RTPRIELEEMGP------SLDLVLRRTHLASDDLYKLSMKMPKALKPKKKKK 253
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 595,188,368
Number of Sequences: 1393205
Number of extensions: 12672482
Number of successful extensions: 52027
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 40083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48162
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31684559424
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
