Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000762A_C01 KMC000762A_c01
(1026 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF71817.1| putative aquaporin PIP1-1 [Vitis berlandieri x Vi... 247 2e-64
gb|AAF71819.1|AF141899_1 putative aquaporin PIP1-3 [Vitis berlan... 246 5e-64
gb|AAD29676.1|AF131201_1 plasma membrane MIP protein [Zea mays] 246 5e-64
gb|AAK26754.1| plasma membrane integral protein ZmPIP1-3 [Zea ma... 245 7e-64
dbj|BAA20076.1| water channel protein [Nicotiana excelsior] 244 2e-63
>gb|AAF71817.1| putative aquaporin PIP1-1 [Vitis berlandieri x Vitis rupestris]
Length = 286
Score = 247 bits (631), Expect = 2e-64
Identities = 117/129 (90%), Positives = 124/129 (95%)
Frame = -3
Query: 1015 RFEMFKGGANVVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPLPIG 836
R+ GGANVVN GYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP+LAPLPIG
Sbjct: 158 RYNSLGGGANVVNAGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIG 217
Query: 835 FAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWDDHWIFWVGPFIGAALAAVYHQIV 656
FAVFLVHLATIPITGTGINPARSLGAAIIYN+DHAWDDHWIFWVGPFIGAALAA+YHQ+V
Sbjct: 218 FAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQVV 277
Query: 655 IRAIPFKTR 629
IRAIPFK++
Sbjct: 278 IRAIPFKSK 286
>gb|AAF71819.1|AF141899_1 putative aquaporin PIP1-3 [Vitis berlandieri x Vitis rupestris]
Length = 287
Score = 246 bits (627), Expect = 5e-64
Identities = 118/132 (89%), Positives = 126/132 (95%)
Frame = -3
Query: 1024 GNARFEMFKGGANVVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPL 845
G+ +E+ GGANVVN GYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP+LAPL
Sbjct: 155 GSQSYEVLGGGANVVNSGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPL 214
Query: 844 PIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWDDHWIFWVGPFIGAALAAVYH 665
PIGFAVFLVHLATIPITGTGINPARSLGAAII+NR+HAWDD WIFWVGPFIGAALAA+YH
Sbjct: 215 PIGFAVFLVHLATIPITGTGINPARSLGAAIIFNREHAWDDMWIFWVGPFIGAALAAMYH 274
Query: 664 QIVIRAIPFKTR 629
QIVIRAIPFK+R
Sbjct: 275 QIVIRAIPFKSR 286
>gb|AAD29676.1|AF131201_1 plasma membrane MIP protein [Zea mays]
Length = 289
Score = 246 bits (627), Expect = 5e-64
Identities = 115/123 (93%), Positives = 122/123 (98%)
Frame = -3
Query: 997 GGANVVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLV 818
GGANVV PGYTKGDGLGAEIVGTF+LVYTVFSATDAKRNARDSHVP+LAPLPIGFAVFLV
Sbjct: 166 GGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLV 225
Query: 817 HLATIPITGTGINPARSLGAAIIYNRDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPF 638
HLATIPITGTGINPARSLGAAIIYNRDHAW+DHWIFWVGPFIGAALAA+YHQ++IRAIPF
Sbjct: 226 HLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPF 285
Query: 637 KTR 629
K+R
Sbjct: 286 KSR 288
>gb|AAK26754.1| plasma membrane integral protein ZmPIP1-3 [Zea mays]
gi|13447795|gb|AAK26755.1| plasma membrane integral
protein ZmPIP1-4 [Zea mays]
Length = 292
Score = 245 bits (626), Expect = 7e-64
Identities = 115/123 (93%), Positives = 121/123 (97%)
Frame = -3
Query: 997 GGANVVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLV 818
GGANVV PGYTKGDGLGAEIVGTF+LVYTVFSATDAKRNARDSHVP+LAPLPIGFAVFLV
Sbjct: 169 GGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLV 228
Query: 817 HLATIPITGTGINPARSLGAAIIYNRDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPF 638
HLATIPITGTGINPARSLGAAIIYNRDHAW DHWIFWVGPFIGAALAA+YHQ++IRAIPF
Sbjct: 229 HLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPF 288
Query: 637 KTR 629
K+R
Sbjct: 289 KSR 291
>dbj|BAA20076.1| water channel protein [Nicotiana excelsior]
Length = 287
Score = 244 bits (622), Expect = 2e-63
Identities = 115/128 (89%), Positives = 122/128 (94%)
Frame = -3
Query: 1012 FEMFKGGANVVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPLPIGF 833
++ GGANVV PGYTKGDGLGAEI+GTFVLVYTVFSATDAKRNARDSHVP+LAPLPIGF
Sbjct: 159 YQRLGGGANVVQPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGF 218
Query: 832 AVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWDDHWIFWVGPFIGAALAAVYHQIVI 653
AVFLVHLATIPITGTGINPARSLGAAII+N D AWDDHWIFWVGPFIGAALAAVYHQI+I
Sbjct: 219 AVFLVHLATIPITGTGINPARSLGAAIIFNHDQAWDDHWIFWVGPFIGAALAAVYHQIII 278
Query: 652 RAIPFKTR 629
RAIPFKT+
Sbjct: 279 RAIPFKTK 286
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 932,222,115
Number of Sequences: 1393205
Number of extensions: 22259884
Number of successful extensions: 70001
Number of sequences better than 10.0: 623
Number of HSP's better than 10.0 without gapping: 63181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69088
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 59877206459
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
