Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000746A_C01 KMC000746A_c01
(515 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06127 probable sugar transport protein F23E12.140 - Arabid... 202 2e-51
ref|NP_195256.2| putative sugar transporter protein; protein id:... 202 2e-51
pir||H86340 Sugar transporter [imported] - Arabidopsis thaliana ... 198 3e-50
ref|NP_173508.1| putative sugar transporter protein; protein id:... 198 3e-50
emb|CAD58958.1| hexose transporter [Hordeum vulgare subsp. vulgare] 193 9e-49
>pir||T06127 probable sugar transport protein F23E12.140 - Arabidopsis thaliana
gi|3080420|emb|CAA18739.1| putative sugar transporter
protein [Arabidopsis thaliana]
gi|7270482|emb|CAB80247.1| putative sugar transporter
protein [Arabidopsis thaliana]
gi|26800695|emb|CAD58692.1| monosaccharide sensing
protein 2 [Arabidopsis thaliana]
Length = 729
Score = 202 bits (514), Expect = 2e-51
Identities = 93/115 (80%), Positives = 107/115 (92%)
Frame = -1
Query: 515 ISTVCVVVYFCFFVMAYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIVTYTLPVML 336
+STV VV+YFCFFVM +GP PNILCSEIFPTRVRG+CIAICAL FWI DIIVTY+LPV+L
Sbjct: 615 LSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLL 674
Query: 335 SSMGLAGVFGLYAIVCCISWVFVYLKVPETKGMPLEVITEFFAVGAKPAASAQNE 171
S+GLAGVFG+YAIVCCISWVFV++KVPETKGMPLEVITEFF+VGA+ A +A+NE
Sbjct: 675 KSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITEFFSVGARQAEAAKNE 729
>ref|NP_195256.2| putative sugar transporter protein; protein id: At4g35300.1,
supported by cDNA: gi_20453188 [Arabidopsis thaliana]
gi|20453189|gb|AAM19835.1| AT4g35300/F23E12_140
[Arabidopsis thaliana]
Length = 739
Score = 202 bits (514), Expect = 2e-51
Identities = 93/115 (80%), Positives = 107/115 (92%)
Frame = -1
Query: 515 ISTVCVVVYFCFFVMAYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIVTYTLPVML 336
+STV VV+YFCFFVM +GP PNILCSEIFPTRVRG+CIAICAL FWI DIIVTY+LPV+L
Sbjct: 625 LSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLL 684
Query: 335 SSMGLAGVFGLYAIVCCISWVFVYLKVPETKGMPLEVITEFFAVGAKPAASAQNE 171
S+GLAGVFG+YAIVCCISWVFV++KVPETKGMPLEVITEFF+VGA+ A +A+NE
Sbjct: 685 KSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITEFFSVGARQAEAAKNE 739
>pir||H86340 Sugar transporter [imported] - Arabidopsis thaliana
gi|4836905|gb|AAD30608.1|AC007369_18 Sugar transporter
[Arabidopsis thaliana]
Length = 734
Score = 198 bits (504), Expect = 3e-50
Identities = 91/115 (79%), Positives = 105/115 (91%)
Frame = -1
Query: 515 ISTVCVVVYFCFFVMAYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIVTYTLPVML 336
+ST CVV+YFCFFVM YGPIPNILCSEIFPTRVRGLCIAICA+VFWIGDIIVTY+LPV+L
Sbjct: 618 LSTGCVVLYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLL 677
Query: 335 SSMGLAGVFGLYAIVCCISWVFVYLKVPETKGMPLEVITEFFAVGAKPAASAQNE 171
SS+GL GVF +YA VC ISW+FVY+KVPETKGMPLEVIT++FA GA+ ASA ++
Sbjct: 678 SSIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLEVITDYFAFGAQAQASAPSK 732
>ref|NP_173508.1| putative sugar transporter protein; protein id: At1g20840.1
[Arabidopsis thaliana]
gi|8886941|gb|AAF80627.1|AC069251_20 F2D10.36
[Arabidopsis thaliana]
Length = 734
Score = 198 bits (504), Expect = 3e-50
Identities = 91/115 (79%), Positives = 105/115 (91%)
Frame = -1
Query: 515 ISTVCVVVYFCFFVMAYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIVTYTLPVML 336
+ST CVV+YFCFFVM YGPIPNILCSEIFPTRVRGLCIAICA+VFWIGDIIVTY+LPV+L
Sbjct: 618 LSTGCVVLYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLL 677
Query: 335 SSMGLAGVFGLYAIVCCISWVFVYLKVPETKGMPLEVITEFFAVGAKPAASAQNE 171
SS+GL GVF +YA VC ISW+FVY+KVPETKGMPLEVIT++FA GA+ ASA ++
Sbjct: 678 SSIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLEVITDYFAFGAQAQASAPSK 732
>emb|CAD58958.1| hexose transporter [Hordeum vulgare subsp. vulgare]
Length = 743
Score = 193 bits (491), Expect = 9e-49
Identities = 88/112 (78%), Positives = 103/112 (91%)
Frame = -1
Query: 515 ISTVCVVVYFCFFVMAYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIVTYTLPVML 336
+ST+ V+VYFCFFVM +GPIPNILC+EIFPT VRG+CIAICAL FWIGDIIVTYTLPVML
Sbjct: 630 LSTISVIVYFCFFVMGFGPIPNILCAEIFPTSVRGICIAICALTFWIGDIIVTYTLPVML 689
Query: 335 SSMGLAGVFGLYAIVCCISWVFVYLKVPETKGMPLEVITEFFAVGAKPAASA 180
+++GLAGVFG+YA+VC I++VFVY+KVPETKGMPLEVITEFF+VGAK A
Sbjct: 690 NAIGLAGVFGIYAVVCMIAFVFVYMKVPETKGMPLEVITEFFSVGAKQGKEA 741
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 476,377,164
Number of Sequences: 1393205
Number of extensions: 10754962
Number of successful extensions: 27430
Number of sequences better than 10.0: 773
Number of HSP's better than 10.0 without gapping: 26115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27086
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
