Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000728A_C02 KMC000728A_c02
(845 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK09427.2|AF322116_1 sucrose-phosphate synthase [Medicago sa... 172 7e-42
sp|Q43876|SPS_VICFA Sucrose-phosphate synthase (UDP-glucose-fruc... 169 6e-41
gb|AAC39433.1| sucrose-phosphate synthase [Actinidia deliciosa] 139 7e-32
gb|AAL86359.1| sucrose phosphate synthase [Actinidia chinensis] 139 7e-32
gb|AAL86361.1| sucrose phosphate synthase [Actinidia chinensis] 135 8e-31
>gb|AAK09427.2|AF322116_1 sucrose-phosphate synthase [Medicago sativa]
Length = 1058
Score = 172 bits (435), Expect = 7e-42
Identities = 87/98 (88%), Positives = 92/98 (93%), Gaps = 2/98 (2%)
Frame = -3
Query: 843 RSQALRYLYVRWGFELSKMVVFVGERGDTDYEGLVGGLHNSVILKGVGSSA--QVHNNRS 670
RSQALRYLYVRWGFELSKMVVFVGE GDTDYEGLVGGLH SVILKGVGS A Q+HNNR+
Sbjct: 961 RSQALRYLYVRWGFELSKMVVFVGECGDTDYEGLVGGLHKSVILKGVGSRAISQLHNNRN 1020
Query: 669 YPLSDVISLDSPNIVEATEGSSSADIQALIEKVGYLKG 556
YPLSDV+ +DSPNIVEATEGSSSADIQAL+EKVGYLKG
Sbjct: 1021 YPLSDVMPMDSPNIVEATEGSSSADIQALLEKVGYLKG 1058
>sp|Q43876|SPS_VICFA Sucrose-phosphate synthase (UDP-glucose-fructose-phosphate
glucosyltransferase) gi|7433841|pir||T12195
sucrose-phosphate synthase (EC 2.4.1.14) - fava bean
gi|1022365|emb|CAA91217.1| sucrose phosphate synthase
[Vicia faba]
Length = 1059
Score = 169 bits (427), Expect = 6e-41
Identities = 86/98 (87%), Positives = 91/98 (92%), Gaps = 2/98 (2%)
Frame = -3
Query: 843 RSQALRYLYVRWGFELSKMVVFVGERGDTDYEGLVGGLHNSVILKGVGSSA--QVHNNRS 670
RSQALRYLYVRWGFELSKMVVFVGE GDTDYEGLVGGLH SVILKGVGS A Q+HNNR+
Sbjct: 962 RSQALRYLYVRWGFELSKMVVFVGECGDTDYEGLVGGLHKSVILKGVGSRAISQLHNNRN 1021
Query: 669 YPLSDVISLDSPNIVEATEGSSSADIQALIEKVGYLKG 556
YPLSDV+ LDSPNIV+ATEGSSSADIQAL+EKVGY KG
Sbjct: 1022 YPLSDVMPLDSPNIVQATEGSSSADIQALLEKVGYHKG 1059
>gb|AAC39433.1| sucrose-phosphate synthase [Actinidia deliciosa]
Length = 769
Score = 139 bits (349), Expect = 7e-32
Identities = 67/98 (68%), Positives = 83/98 (84%), Gaps = 2/98 (2%)
Frame = -3
Query: 843 RSQALRYLYVRWGFELSKMVVFVGERGDTDYEGLVGGLHNSVILKGV--GSSAQVHNNRS 670
RSQALRYLY+RWG +LSKMVVFVGE GDTDYEGL+GG+H SVILKGV G + Q+H NR+
Sbjct: 672 RSQALRYLYLRWGVDLSKMVVFVGESGDTDYEGLLGGIHKSVILKGVCSGPTNQLHANRT 731
Query: 669 YPLSDVISLDSPNIVEATEGSSSADIQALIEKVGYLKG 556
YPLSDV+ +DSPNIV+A E SSAD++ + K+G++KG
Sbjct: 732 YPLSDVLPIDSPNIVQAAEECSSADLRTSLLKLGFIKG 769
>gb|AAL86359.1| sucrose phosphate synthase [Actinidia chinensis]
Length = 624
Score = 139 bits (349), Expect = 7e-32
Identities = 67/98 (68%), Positives = 83/98 (84%), Gaps = 2/98 (2%)
Frame = -3
Query: 843 RSQALRYLYVRWGFELSKMVVFVGERGDTDYEGLVGGLHNSVILKGV--GSSAQVHNNRS 670
RSQALRYLY+RWG +LSKMVVFVGE GDTDYEGL+GG+H SVILKGV G + Q+H NR+
Sbjct: 527 RSQALRYLYLRWGVDLSKMVVFVGESGDTDYEGLLGGIHKSVILKGVCSGPTNQLHANRT 586
Query: 669 YPLSDVISLDSPNIVEATEGSSSADIQALIEKVGYLKG 556
YPLSDV+ +DSPNIV+A E SSAD++ + K+G++KG
Sbjct: 587 YPLSDVLPIDSPNIVQAAEECSSADLRTSLLKLGFIKG 624
>gb|AAL86361.1| sucrose phosphate synthase [Actinidia chinensis]
Length = 655
Score = 135 bits (340), Expect = 8e-31
Identities = 65/97 (67%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Frame = -3
Query: 843 RSQALRYLYVRWGFELSKMVVFVGERGDTDYEGLVGGLHNSVILKGV--GSSAQVHNNRS 670
RSQALRYLY+RWG +LSKMVVFVGE GDTDYEGL+GG+H SVILKGV G + Q+H NR+
Sbjct: 558 RSQALRYLYLRWGVDLSKMVVFVGETGDTDYEGLLGGIHKSVILKGVCSGPTHQLHANRT 617
Query: 669 YPLSDVISLDSPNIVEATEGSSSADIQALIEKVGYLK 559
YPLSDV+ +DSPNIV+A E S AD++ + K+G++K
Sbjct: 618 YPLSDVLPIDSPNIVQAAEKCSGADLRTSLGKLGFIK 654
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 750,200,812
Number of Sequences: 1393205
Number of extensions: 17134246
Number of successful extensions: 42569
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 40448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42442
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 44316199683
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
