Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000723A_C01 KMC000723A_c01
(1026 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172558.1| unknown protein; protein id: At1g10890.1 [Arabi... 189 6e-47
gb|AAM08880.1|AC113339_26 Hypothetical protein [Oryza sativa] 179 8e-44
ref|NP_196838.1| putative protein; protein id: At5g13340.1 [Arab... 173 4e-42
gb|EAA13904.1| agCP8607 [Anopheles gambiae str. PEST] 113 5e-24
ref|NP_060481.1| hypothetical protein FLJ10154 [Homo sapiens] gi... 108 2e-22
>ref|NP_172558.1| unknown protein; protein id: At1g10890.1 [Arabidopsis thaliana]
gi|25402628|pir||F86242 unknown protein, 98896-95855
[imported] - Arabidopsis thaliana
gi|1931653|gb|AAB65488.1| unknown protein; 98896-95855
[Arabidopsis thaliana]
Length = 592
Score = 189 bits (480), Expect = 6e-47
Identities = 96/134 (71%), Positives = 120/134 (88%)
Frame = -2
Query: 671 RRRKEAELKLIEEETAKRVEEAIRKRVEESLNSEEVQVEIQRRLEEGRKRLIVEVAVQLE 492
RR++EAELKLIEEET KRVEEAIRK+VEESL SE++++EI LEEGRKRL EVA QLE
Sbjct: 72 RRQREAELKLIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEVAAQLE 131
Query: 491 KEKEAALIEAREKEEQARKEKEDLDRMLEENRKKIEEAQRREALEQPRREEERYRELEEI 312
+EKEA+LIEA+EKEE+ ++EKE+ +R+ EEN K++EEAQR+EA+E+ R+EEERYRELEE+
Sbjct: 132 EEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEEL 191
Query: 311 QRQKEEAMRRKKQD 270
QRQKEEAMRRKK +
Sbjct: 192 QRQKEEAMRRKKAE 205
Score = 50.4 bits (119), Expect = 4e-05
Identities = 29/50 (58%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Frame = -1
Query: 318 RDTETERRSHEKEETRRRSK-----NALNQIKLLGKNKSRPKLSFALGSK 184
R E E +KEE RR K L Q+KLLGKNKSRPKLSFAL SK
Sbjct: 184 RYRELEELQRQKEEAMRRKKAEEEEERLKQMKLLGKNKSRPKLSFALSSK 233
Score = 37.4 bits (85), Expect = 0.38
Identities = 28/83 (33%), Positives = 42/83 (49%)
Frame = -2
Query: 668 RRKEAELKLIEEETAKRVEEAIRKRVEESLNSEEVQVEIQRRLEEGRKRLIVEVAVQLEK 489
++++ E + I EE KRVEEA RK E EE E R LEE L++
Sbjct: 149 QQEKEERERIAEENLKRVEEAQRKEAMERQRKEE---ERYRELEE------------LQR 193
Query: 488 EKEAALIEAREKEEQARKEKEDL 420
+KE A+ + +EE+ R ++ L
Sbjct: 194 QKEEAMRRKKAEEEEERLKQMKL 216
Score = 33.5 bits (75), Expect = 5.5
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Frame = -3
Query: 634 KRLQRELKKQFVRELKKA*ILRRFRWRFRGGWKRDERDLLLKLQFNLKKKKKLLLLRLER 455
KR++ ++K+ L+ I G KR ++ +L+ +K+ L+ + +
Sbjct: 88 KRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEVAAQLEE--EKEASLIEAKEKE 145
Query: 454 RRNKLVKRRKILIGCLRRTGRRLKKLREGKLWSSQEGRRNDIGS*KRYRD-----RKKKP 290
R + K + I LK++ E + + E +R + +RYR+ R+K+
Sbjct: 146 EREQQEKEERERIA-----EENLKRVEEAQRKEAMERQRKEE---ERYRELEELQRQKEE 197
Query: 289 *EGRNKTEEQE-RFKSNKVVRKKQVPTKVVICSWIQMTT--SISFCLILKCLCSRP 131
R K EE+E R K K++ K + K+ +MTT + ++ + LC P
Sbjct: 198 AMRRKKAEEEEERLKQMKLLGKNKSRPKLSFALSSKMTTMSDLDEIMVAEILCRTP 253
>gb|AAM08880.1|AC113339_26 Hypothetical protein [Oryza sativa]
Length = 330
Score = 179 bits (453), Expect = 8e-44
Identities = 97/158 (61%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Frame = -2
Query: 746 ELHLYVAFPPV*MTILLPNILL-CFHRRRKEAELKLIEEETAKRVEEAIRKRVEESLNSE 570
E+ +Y+ F + L N LL +RR+KEAELKL+EEE A+RVEE+IRK VE+ LNSE
Sbjct: 157 EIRVYMCFNHL---PLPANFLLNLVNRRQKEAELKLLEEELARRVEESIRKNVEDRLNSE 213
Query: 569 EVQVEIQRRLEEGRKRLIVEVAVQLEKEKEAALIEAREKEEQARKEKEDLDRMLEENRKK 390
+++ EI+RR+EEG K+L EV QL+KEKE AL EAR K EQ R+E+E+LDRMLEENR+K
Sbjct: 214 DIKNEIKRRVEEGIKQLFDEVDAQLQKEKETALREARHKAEQERREREELDRMLEENRRK 273
Query: 389 IEEAQRREALEQPRREEERYRELEEIQRQKEEAMRRKK 276
+EEAQR+EALEQ ++E ER+ ELE IQ+Q+E+AMRRKK
Sbjct: 274 VEEAQRKEALEQQQKELERFLELERIQKQREDAMRRKK 311
>ref|NP_196838.1| putative protein; protein id: At5g13340.1 [Arabidopsis thaliana]
gi|11358306|pir||T48581 hypothetical protein T31B5.160 -
Arabidopsis thaliana gi|7529289|emb|CAB86641.1| putative
protein [Arabidopsis thaliana]
Length = 242
Score = 173 bits (438), Expect = 4e-42
Identities = 85/132 (64%), Positives = 113/132 (85%)
Frame = -2
Query: 671 RRRKEAELKLIEEETAKRVEEAIRKRVEESLNSEEVQVEIQRRLEEGRKRLIVEVAVQLE 492
R + EAELK +EEETA+R+EEA+RK VEE + +EEV+ EI+RR +E +++ ++V +QL+
Sbjct: 82 RLQHEAELKRLEEETAQRIEEAVRKNVEERMKTEEVKEEIERRTKEAYEKMFLDVEIQLK 141
Query: 491 KEKEAALIEAREKEEQARKEKEDLDRMLEENRKKIEEAQRREALEQPRREEERYRELEEI 312
KEKEAAL EAR KEEQAR+E+E+LD+MLEEN +++EE+QRREA+E R+EEERYRELE +
Sbjct: 142 KEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELELL 201
Query: 311 QRQKEEAMRRKK 276
QRQKEEA RRKK
Sbjct: 202 QRQKEEAARRKK 213
Score = 40.4 bits (93), Expect = 0.045
Identities = 25/70 (35%), Positives = 43/70 (60%), Gaps = 1/70 (1%)
Frame = -2
Query: 488 EKEAALIEAREKEEQARKEKE-DLDRMLEENRKKIEEAQRREALEQPRREEERYRELEEI 312
E A+ +E+E++AR + E +L R+ EE ++IEEA R+ E+ + EE + EEI
Sbjct: 66 EHRIAIEVKKEQEDKARLQHEAELKRLEEETAQRIEEAVRKNVEERMKTEEVK----EEI 121
Query: 311 QRQKEEAMRR 282
+R+ +EA +
Sbjct: 122 ERRTKEAYEK 131
>gb|EAA13904.1| agCP8607 [Anopheles gambiae str. PEST]
Length = 272
Score = 113 bits (282), Expect = 5e-24
Identities = 59/136 (43%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Frame = -2
Query: 671 RRRKEAELKLIEEETAKRVEEAIRKRVEESLNS--EEVQVEIQRRLEEGRKRLIVEVAVQ 498
RR+KEAE K+IEEE AKR+E ++KRVEE L +E++ E+QRR+E +K++ E+ ++
Sbjct: 114 RRQKEAEQKMIEEEAAKRIELLVKKRVEEELEKRKDEIETEVQRRVEAAKKQMEQEMMLE 173
Query: 497 LEKEKEAALIEAREKEEQARKEKEDLDRMLEENRKKIEEAQRREALEQPRREEERYRELE 318
LEK +E A E R +EE+ K++++L+ +L EN +KIEEAQR+ A ++ EE+ + E
Sbjct: 174 LEKRREQAREEERRREEEELKKRQELENILAENNRKIEEAQRKLAEDRLAIIEEQRKMDE 233
Query: 317 EIQRQKEEAMRRKKQD 270
E Q+ ++E +R K++
Sbjct: 234 ERQKMRKEQEKRIKEE 249
Score = 43.5 bits (101), Expect = 0.005
Identities = 26/98 (26%), Positives = 54/98 (54%)
Frame = -2
Query: 563 QVEIQRRLEEGRKRLIVEVAVQLEKEKEAALIEAREKEEQARKEKEDLDRMLEENRKKIE 384
++E QRR +E +++I E E K L+ + EE+ K K++++ E ++++E
Sbjct: 109 EMERQRRQKEAEQKMIEE-----EAAKRIELLVKKRVEEELEKRKDEIET---EVQRRVE 160
Query: 383 EAQRREALEQPRREEERYRELEEIQRQKEEAMRRKKQD 270
A+++ E E+R + E +R++EE +K+Q+
Sbjct: 161 AAKKQMEQEMMLELEKRREQAREEERRREEEELKKRQE 198
Score = 42.7 bits (99), Expect = 0.009
Identities = 31/98 (31%), Positives = 52/98 (52%), Gaps = 8/98 (8%)
Frame = -2
Query: 539 EEGRKRLIVEVAVQLEKEKEAALIEAREK--EEQARKE-----KEDLDRMLEENRKKIE- 384
+ R R + EV E E++ EA +K EE+A K K+ ++ LE+ + +IE
Sbjct: 94 KSSRSRKLTEVERLAEMERQRRQKEAEQKMIEEEAAKRIELLVKKRVEEELEKRKDEIET 153
Query: 383 EAQRREALEQPRREEERYRELEEIQRQKEEAMRRKKQD 270
E QRR + + E+E ELE+ + Q E RR++++
Sbjct: 154 EVQRRVEAAKKQMEQEMMLELEKRREQAREEERRREEE 191
Score = 35.4 bits (80), Expect = 1.4
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1
Query: 321 RRDTETERRSHEKEETRRRSKNALNQIKLLGKNKSRPKLSFAL 193
+R + ER+ KE+ +R + Q +LGKN SRPKLSF+L
Sbjct: 228 QRKMDEERQKMRKEQEKRIKEE---QKMILGKNNSRPKLSFSL 267
>ref|NP_060481.1| hypothetical protein FLJ10154 [Homo sapiens]
gi|7022030|dbj|BAA91467.1| unnamed protein product [Homo
sapiens]
Length = 273
Score = 108 bits (269), Expect = 2e-22
Identities = 57/135 (42%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Frame = -2
Query: 668 RRKEAELKLIEEETAKRVEEAIRKRVEESLNS--EEVQVEIQRRLEEGRKRLIVEVAVQL 495
R++E E KLIEEETA+RVEE + KRVEE L +E++ E+ RR+EE ++ + ++ +L
Sbjct: 117 RQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEEL 176
Query: 494 EKEKEAALIEAREKEEQARKEKEDLDRMLEENRKKIEEAQRREALEQPRREEERYRELEE 315
E++++A L + +EE+ R ++E+L+R+LEEN +KI EAQ + A EQ R EE+ + EE
Sbjct: 177 ERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEE 236
Query: 314 IQRQKEEAMRRKKQD 270
+ ++E R++K++
Sbjct: 237 RMKLEQERQRQQKEE 251
Score = 35.8 bits (81), Expect = 1.1
Identities = 21/46 (45%), Positives = 30/46 (64%), Gaps = 4/46 (8%)
Frame = -1
Query: 318 RDTETERRSHEK----EETRRRSKNALNQIKLLGKNKSRPKLSFAL 193
R E +R+ HE+ E+ R+R + +I +LGK KSRPKLSF+L
Sbjct: 225 RIVEEQRKIHEERMKLEQERQRQQKEEQKI-ILGKGKSRPKLSFSL 269
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 836,694,593
Number of Sequences: 1393205
Number of extensions: 18464258
Number of successful extensions: 151031
Number of sequences better than 10.0: 6879
Number of HSP's better than 10.0 without gapping: 88632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125566
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 59877206459
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
