Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000707A_C01 KMC000707A_c01
(561 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC10768.1| putative Regulatory protein NPR1 (Nonexpresser o... 142 4e-33
gb|AAM98084.1| AT5g45110/K17O22_11 [Arabidopsis thaliana] gi|284... 131 6e-30
ref|NP_199324.1| regulatory protein NPR1-like; transcription fac... 122 3e-27
ref|NP_193701.1| putative protein; protein id: At4g19660.1 [Arab... 115 3e-25
dbj|BAB12719.1| putative regulatory protein NPR1 [Oryza sativa (... 97 1e-19
>dbj|BAC10768.1| putative Regulatory protein NPR1 (Nonexpresser of PR genes 1)
[Oryza sativa (japonica cultivar-group)]
Length = 635
Score = 142 bits (357), Expect = 4e-33
Identities = 72/109 (66%), Positives = 88/109 (80%), Gaps = 3/109 (2%)
Frame = -1
Query: 558 SNGNLREVDLNETPIMQNKRLLSRMEALMKTVEMGRRYFPHCSEVLDKFMEDDL---PDL 388
++G L+EVDLNETP+ QNKRL SR++ALMKTVE+GRRYFP+CS+VLDKF+EDDL PD
Sbjct: 519 TSGKLKEVDLNETPVTQNKRLRSRVDALMKTVELGRRYFPNCSQVLDKFLEDDLPDSPDA 578
Query: 387 FYLEKGTQEEQRIKRKRFMELKDDVNKAFNKDKAVFSRSGISSSSSSSS 241
L+ GT +EQ +KR RF ELK+DV KAF+KD+A S I SSSSSSS
Sbjct: 579 LDLQNGTSDEQNVKRMRFCELKEDVRKAFSKDRADNSMFSILSSSSSSS 627
>gb|AAM98084.1| AT5g45110/K17O22_11 [Arabidopsis thaliana]
gi|28416505|gb|AAO42783.1| AT5g45110/K17O22_11
[Arabidopsis thaliana]
Length = 586
Score = 131 bits (329), Expect = 6e-30
Identities = 72/120 (60%), Positives = 93/120 (77%), Gaps = 7/120 (5%)
Frame = -1
Query: 561 GSNGNLREVDLNETPIMQNKRLLSRMEALMKTVEMGRRYFPHCSEVLDKFM----EDDLP 394
G GNL +VDLNETP MQ +RLL+RM ALMKTVE GRR+FP+ SEVLDK+M +DD+
Sbjct: 464 GLTGNLSQVDLNETPHMQTQRLLTRMVALMKTVETGRRFFPYGSEVLDKYMAEYIDDDIL 523
Query: 393 DLFYLEKGTQEEQRIKRKRFMELKDDVNKAFNKDK-AVFSRSGISSSS--SSSSLRDSLY 223
D F+ EKG+ E+R+KR R+ ELKDDV KA++KDK + +RS +S+SS SSSS+RD L+
Sbjct: 524 DDFHFEKGSTHERRLKRMRYRELKDDVQKAYSKDKESKIARSCLSASSSPSSSSIRDDLH 583
>ref|NP_199324.1| regulatory protein NPR1-like; transcription factor inhibitor I
kappa B-like; protein id: At5g45110.1 [Arabidopsis
thaliana] gi|9758986|dbj|BAB09496.1| regulatory protein
NPR1-like; transcription factor inhibitor I kappa B-like
[Arabidopsis thaliana]
Length = 593
Score = 122 bits (306), Expect = 3e-27
Identities = 71/127 (55%), Positives = 92/127 (71%), Gaps = 14/127 (11%)
Frame = -1
Query: 561 GSNGNLREVDLNETPIMQNKRLLSRMEALMKT-------VEMGRRYFPHCSEVLDKFM-- 409
G GNL +VDLNETP MQ +RLL+RM ALMKT E GRR+FP+ SEVLDK+M
Sbjct: 464 GLTGNLSQVDLNETPHMQTQRLLTRMVALMKTGNKKLALFETGRRFFPYGSEVLDKYMAE 523
Query: 408 --EDDLPDLFYLEKGTQEEQRIKRKRFMELKDDVNKAFNKDK-AVFSRSGISSSS--SSS 244
+DD+ D F+ EKG+ E+R+KR R+ ELKDDV KA++KDK + +RS +S+SS SSS
Sbjct: 524 YIDDDILDDFHFEKGSTHERRLKRMRYRELKDDVQKAYSKDKESKIARSCLSASSSPSSS 583
Query: 243 SLRDSLY 223
S+RD L+
Sbjct: 584 SIRDDLH 590
>ref|NP_193701.1| putative protein; protein id: At4g19660.1 [Arabidopsis thaliana]
gi|7487070|pir||T04747 hypothetical protein T16H5.20 -
Arabidopsis thaliana gi|3250675|emb|CAA19683.1| putative
protein [Arabidopsis thaliana]
gi|7268762|emb|CAB78968.1| putative protein [Arabidopsis
thaliana]
Length = 601
Score = 115 bits (289), Expect = 3e-25
Identities = 68/139 (48%), Positives = 90/139 (63%), Gaps = 31/139 (22%)
Frame = -1
Query: 549 NLREVDLNETPIMQNKRLLSRMEALMKT---------------------------VEMGR 451
NL +VDLNETP +Q KR+L+RM+ALMKT VE GR
Sbjct: 461 NLGKVDLNETPYVQTKRMLTRMKALMKTGKSLRKCTFKFYSLTTRLTDSKPFNNAVETGR 520
Query: 450 RYFPHCSEVLDKFME----DDLPDLFYLEKGTQEEQRIKRKRFMELKDDVNKAFNKDKAV 283
RYFP C EVLDK+M+ +++PD+ Y EKGT +E+R KR R+ ELK+DV KA++KDK
Sbjct: 521 RYFPSCYEVLDKYMDQYMDEEIPDMSYPEKGTVKERRQKRMRYNELKNDVKKAYSKDKV- 579
Query: 282 FSRSGISSSSSSSSLRDSL 226
+RS +SSSS +SSLR++L
Sbjct: 580 -ARSCLSSSSPASSLREAL 597
>dbj|BAB12719.1| putative regulatory protein NPR1 [Oryza sativa (japonica
cultivar-group)] gi|10934082|dbj|BAB16860.1| Arabidopsis
thaliana regulatory protein NPR1 like protein [Oryza
sativa (japonica cultivar-group)]
Length = 582
Score = 97.1 bits (240), Expect = 1e-19
Identities = 53/100 (53%), Positives = 71/100 (71%)
Frame = -1
Query: 537 VDLNETPIMQNKRLLSRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTQEE 358
VDLNE+P + + L+RM AL KTVE+G+R+FP CS VLDK M+D+ D L + T E
Sbjct: 480 VDLNESPFIMKEEHLARMTALSKTVELGKRFFPRCSNVLDKIMDDE-TDPVSLGRDTSAE 538
Query: 357 QRIKRKRFMELKDDVNKAFNKDKAVFSRSGISSSSSSSSL 238
KRKRF +L+D + KAF++DK RSG+SSSSSS+S+
Sbjct: 539 ---KRKRFHDLQDVLQKAFHEDKEENDRSGLSSSSSSTSI 575
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 442,042,067
Number of Sequences: 1393205
Number of extensions: 8953876
Number of successful extensions: 27201
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 25131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26889
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
