>KMC000698A_C01 KMC000698A_c01
ATCTTAAAAAAATGACATTTTGAAGAAATAATTTTATGATGGCAGGAAGATAGTCCTCAC
TTTCCATAGCATGTCTGTCTGTTACTGAAATAATCTGCTTTGCTAGAACAGATACAGAAA
TCGCTCTGTACTCAGATCATGTGGCTGTACACAGCAGGTAATCAGATATCGAACACATCT
CAACCTGCAACATCTCTATTACTAAACTATTAAAGACTTTCAGTAGTCCTTTCACCAACA
AACTGGACCATTCTTTCACCTGCACCTAAAATCGGATGGAGCTCACTGCAAGTCAAACAA
CCTCAACTTCAGTTCATTAATGCTGAGCAGGTTCCCTCAACGATATATTTTAGGTGAATA
TGCATGCAGCCAGTCTTTTCTTCCAATGTACAATTCTGTACATCTCCTTATTTCAGTAGC
CAAATTTATCATTC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC000698A_C01 KMC000698A_c01
         (434 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_497761.1| Putative nuclear protein, nematode specific [Ca...    33  1.1
sp|O48073|CYB_ERYEL Cytochrome b gi|2842935|gb|AAC01825.1| cytoc...    31  3.1
ref|NP_703392.1| hypothetical protein [Plasmodium falciparum 3D7...    31  4.0
ref|NP_103024.1| hypothetical protein [Mesorhizobium loti] gi|14...    30  5.2
sp|O48080|CYB_ERYMN Cytochrome b gi|2842969|gb|AAC01842.1| cytoc...    30  6.8

>ref|NP_497761.1| Putative nuclear protein, nematode specific [Caenorhabditis
           elegans] gi|7497425|pir||T19935 hypothetical protein
           C44F1.1 - Caenorhabditis elegans
           gi|3874921|emb|CAA88852.1| Hypothetical protein C44F1.1
           [Caenorhabditis elegans] gi|3876660|emb|CAA84319.1|
           Hypothetical protein C44F1.1 [Caenorhabditis elegans]
          Length = 608

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 174 HISTCNISITKLLKTFSSPFTNKLDHSFTCT*NRMELT---ASQTTSTSVH 317
           H  + N+ I+ LLK+F+SP TN+ DH  + T      T   AS   ST VH
Sbjct: 539 HSLSSNLDISTLLKSFTSPPTNEEDHEMSDTSGDDPPTSSIASLLQSTEVH 589

>sp|O48073|CYB_ERYEL Cytochrome b gi|2842935|gb|AAC01825.1| cytochrome b [Eryx elegans]
          Length = 371

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 244 WTILSPAPKIGWSSLQVKQPQLQFINAEQVPSTIYFR*ICMQPV 375
           WT+++    I WS+ +  +P    I+  Q+ STIYF  + M P+
Sbjct: 318 WTLVATFAVITWSATKPVEPPFTVIS--QIASTIYFLFLIMNPI 359

>ref|NP_703392.1| hypothetical protein [Plasmodium falciparum 3D7]
           gi|23504532|emb|CAD51412.1| hypothetical protein
           [Plasmodium falciparum 3D7]
          Length = 2349

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 11/27 (40%), Positives = 16/27 (58%)
 Frame = -1

Query: 113 ICSSKADYFSNRQTCYGK*GLSSCHHK 33
           +C     YF+N +TC+ K   + CHHK
Sbjct: 859 MCHPCEYYFTNYKTCFNKYNCNKCHHK 885

>ref|NP_103024.1| hypothetical protein [Mesorhizobium loti]
           gi|14022200|dbj|BAB48810.1| hypothetical protein
           [Mesorhizobium loti]
          Length = 465

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 208 Y*RLSVVLSPTNWTILSPAPKIG-WSSLQVKQPQLQFINAEQVPSTIY 348
           Y  L  +  P NW + SP  KIG W  +  K  +L + ++ +  S  Y
Sbjct: 84  YDHLPYIDFPKNWPVFSPKDKIGDWLEMYTKVMELNYWSSTEAKSASY 131

>sp|O48080|CYB_ERYMN Cytochrome b gi|2842969|gb|AAC01842.1| cytochrome b [Eryx miliaris
           nogajorum]
          Length = 371

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 244 WTILSPAPKIGWSSLQVKQPQLQFINAEQVPSTIYFR*ICMQPV 375
           WT+++    I W++ +  +P    I+  Q+ STIYF  + M P+
Sbjct: 318 WTLVATFMVITWAATKPVEPPFTMIS--QIASTIYFLFLIMNPI 359

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 337,126,847
Number of Sequences: 1393205
Number of extensions: 6495183
Number of successful extensions: 13955
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13951
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 6756111528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GENLf031d12 BP063976 1 499 2 MPDL012a02_f AV777113 66 416

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