Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000673A_C01 KMC000673A_c01
(624 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199347.1| cytochrome p450 family; protein id: At5g45340.1... 44 0.002
pir||T04444 cytochrome P450 - Arabidopsis thaliana gi|3046815|em... 44 0.002
ref|NP_567581.1| cytochrome p450 family; protein id: At4g19230.1... 44 0.002
ref|NP_180473.1| taxane 13-alpha-hydroxylase(cytochrome p450 fam... 36 0.47
ref|NP_704421.1| hypothetical protein [Plasmodium falciparum 3D7... 33 4.0
>ref|NP_199347.1| cytochrome p450 family; protein id: At5g45340.1, supported by cDNA:
gi_18086489, supported by cDNA: gi_20857157 [Arabidopsis
thaliana] gi|10177005|dbj|BAB10255.1| cytochrome P450
[Arabidopsis thaliana] gi|18086490|gb|AAL57698.1|
AT5g45340/K9E15_12 [Arabidopsis thaliana]
gi|20857158|gb|AAM26703.1| AT5g45340/K9E15_12
[Arabidopsis thaliana]
Length = 463
Score = 43.9 bits (102), Expect = 0.002
Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 384 RCASMFKSHGLSWSDDFFSSL*ATKFVF-KKAQLFNPTFPASKERMFG 244
R S+FK+H L SS A KFV K+ LF PTFPASKERM G
Sbjct: 67 RYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLG 114
>pir||T04444 cytochrome P450 - Arabidopsis thaliana gi|3046815|emb|CAA16713.1|
cytochrome P450 [Arabidopsis thaliana]
gi|7268718|emb|CAB78925.1| cytochrome P450 [Arabidopsis
thaliana]
Length = 457
Score = 43.9 bits (102), Expect = 0.002
Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 384 RCASMFKSHGLSWSDDFFSSL*ATKFVF-KKAQLFNPTFPASKERMFG 244
R S+FK+H L SS A KFV K+ LF PTFPASKERM G
Sbjct: 67 RYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLG 114
>ref|NP_567581.1| cytochrome p450 family; protein id: At4g19230.1, supported by cDNA:
gi_15293092, supported by cDNA: gi_20259298 [Arabidopsis
thaliana] gi|15293093|gb|AAK93657.1| putative cytochrome
P450 protein [Arabidopsis thaliana]
gi|20259299|gb|AAM14385.1| putative cytochrome P450
protein [Arabidopsis thaliana]
Length = 467
Score = 43.9 bits (102), Expect = 0.002
Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 384 RCASMFKSHGLSWSDDFFSSL*ATKFVF-KKAQLFNPTFPASKERMFG 244
R S+FK+H L SS A KFV K+ LF PTFPASKERM G
Sbjct: 67 RYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLG 114
>ref|NP_180473.1| taxane 13-alpha-hydroxylase(cytochrome p450 family), putative;
protein id: At2g29090.1 [Arabidopsis thaliana]
gi|7430729|pir||T02739 probable cytochrome P450
At2g29090 [imported] - Arabidopsis thaliana
gi|3461849|gb|AAC33235.1| putative cytochrome P450
[Arabidopsis thaliana]
Length = 482
Score = 35.8 bits (81), Expect = 0.47
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 372 MFKSHGLSWSDDFFSSL*ATKFVF-KKAQLFNPTFPASKERMFG 244
+FK+H L SS A + V KA LF PT+P SKERM G
Sbjct: 84 IFKTHILGCPCVMISSPEAARMVLVSKAHLFKPTYPPSKERMIG 127
>ref|NP_704421.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23499160|emb|CAD51240.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 566
Score = 32.7 bits (73), Expect = 4.0
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +3
Query: 522 SCVKENELEQKEKTDLQTLHKMIFV 596
SC+KENEL+Q+ K ++Q+L+K + +
Sbjct: 30 SCLKENELKQESKNNIQSLNKNVVI 54
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 496,988,189
Number of Sequences: 1393205
Number of extensions: 10294683
Number of successful extensions: 21412
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21403
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25301904073
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
