Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000657A_C01 KMC000657A_c01
(665 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB61243.1| nodule inception protein [Lotus japonicus] gi|64... 276 1e-73
emb|CAD37946.1| nodule inception protein [Pisum sativum] 177 9e-44
emb|CAD37947.1| nodule inception protein [Pisum sativum] 177 9e-44
emb|CAD37949.1| nodule inception protein [Pisum sativum] 177 9e-44
emb|CAD37948.1| nodule inception protein [Pisum sativum] 177 9e-44
>emb|CAB61243.1| nodule inception protein [Lotus japonicus] gi|6453569|emb|CAB61338.1|
nodule inception protein [Lotus japonicus]
Length = 878
Score = 276 bits (707), Expect = 1e-73
Identities = 137/137 (100%), Positives = 137/137 (100%)
Frame = -2
Query: 664 ELLNNASIQEDTKRFSRPKSQTLPPLSDSSGWNSLETGAFRVKATFADEKIRFSLQPIWG 485
ELLNNASIQEDTKRFSRPKSQTLPPLSDSSGWNSLETGAFRVKATFADEKIRFSLQPIWG
Sbjct: 742 ELLNNASIQEDTKRFSRPKSQTLPPLSDSSGWNSLETGAFRVKATFADEKIRFSLQPIWG 801
Query: 484 FSDLQLEIARRFNLNDVTNILLKYLDDDGEWVVLACDGDLEECKDIHRSSQSRTIRLSLF 305
FSDLQLEIARRFNLNDVTNILLKYLDDDGEWVVLACDGDLEECKDIHRSSQSRTIRLSLF
Sbjct: 802 FSDLQLEIARRFNLNDVTNILLKYLDDDGEWVVLACDGDLEECKDIHRSSQSRTIRLSLF 861
Query: 304 QASPLNLANTFRNSSPS 254
QASPLNLANTFRNSSPS
Sbjct: 862 QASPLNLANTFRNSSPS 878
>emb|CAD37946.1| nodule inception protein [Pisum sativum]
Length = 922
Score = 177 bits (450), Expect = 9e-44
Identities = 92/126 (73%), Positives = 104/126 (82%), Gaps = 8/126 (6%)
Frame = -2
Query: 607 SQTLPPL-------SDSSGWNSLETGAFRVKATFADEKIRFSLQPIWGFSDLQLEIARRF 449
+QTLPP ++SS LE GAFRVKATFADEKIRFSLQ +W F DLQLEIARRF
Sbjct: 794 NQTLPPRPTVTWNNNNSSSSGLLERGAFRVKATFADEKIRFSLQAVWCFRDLQLEIARRF 853
Query: 448 NLNDVTNILLKYLDDDGEWVVLACDGDLEECKDIHRSSQSRTIRLSLFQASPL-NLANTF 272
NLND+ N++LKYLDD+GEWVVLACD DLEECKD+H SS +RTIRLSLFQASPL NLAN+F
Sbjct: 854 NLNDMNNLVLKYLDDEGEWVVLACDSDLEECKDLHTSSHTRTIRLSLFQASPLNNLANSF 913
Query: 271 RNSSPS 254
RN+S S
Sbjct: 914 RNNSSS 919
>emb|CAD37947.1| nodule inception protein [Pisum sativum]
Length = 924
Score = 177 bits (450), Expect = 9e-44
Identities = 92/126 (73%), Positives = 104/126 (82%), Gaps = 8/126 (6%)
Frame = -2
Query: 607 SQTLPPL-------SDSSGWNSLETGAFRVKATFADEKIRFSLQPIWGFSDLQLEIARRF 449
+QTLPP ++SS LE GAFRVKATFADEKIRFSLQ +W F DLQLEIARRF
Sbjct: 796 NQTLPPRPTVTWNNNNSSSSGLLERGAFRVKATFADEKIRFSLQAVWCFRDLQLEIARRF 855
Query: 448 NLNDVTNILLKYLDDDGEWVVLACDGDLEECKDIHRSSQSRTIRLSLFQASPL-NLANTF 272
NLND+ N++LKYLDD+GEWVVLACD DLEECKD+H SS +RTIRLSLFQASPL NLAN+F
Sbjct: 856 NLNDMNNLVLKYLDDEGEWVVLACDSDLEECKDLHTSSHTRTIRLSLFQASPLNNLANSF 915
Query: 271 RNSSPS 254
RN+S S
Sbjct: 916 RNNSSS 921
>emb|CAD37949.1| nodule inception protein [Pisum sativum]
Length = 924
Score = 177 bits (450), Expect = 9e-44
Identities = 92/126 (73%), Positives = 104/126 (82%), Gaps = 8/126 (6%)
Frame = -2
Query: 607 SQTLPPL-------SDSSGWNSLETGAFRVKATFADEKIRFSLQPIWGFSDLQLEIARRF 449
+QTLPP ++SS LE GAFRVKATFADEKIRFSLQ +W F DLQLEIARRF
Sbjct: 796 NQTLPPRPTVTWNNNNSSSSGLLERGAFRVKATFADEKIRFSLQAVWCFRDLQLEIARRF 855
Query: 448 NLNDVTNILLKYLDDDGEWVVLACDGDLEECKDIHRSSQSRTIRLSLFQASPL-NLANTF 272
NLND+ N++LKYLDD+GEWVVLACD DLEECKD+H SS +RTIRLSLFQASPL NLAN+F
Sbjct: 856 NLNDMNNLVLKYLDDEGEWVVLACDSDLEECKDLHTSSHTRTIRLSLFQASPLNNLANSF 915
Query: 271 RNSSPS 254
RN+S S
Sbjct: 916 RNNSSS 921
>emb|CAD37948.1| nodule inception protein [Pisum sativum]
Length = 921
Score = 177 bits (450), Expect = 9e-44
Identities = 92/126 (73%), Positives = 104/126 (82%), Gaps = 8/126 (6%)
Frame = -2
Query: 607 SQTLPPL-------SDSSGWNSLETGAFRVKATFADEKIRFSLQPIWGFSDLQLEIARRF 449
+QTLPP ++SS LE GAFRVKATFADEKIRFSLQ +W F DLQLEIARRF
Sbjct: 793 NQTLPPRPTVTWNNNNSSSSGLLERGAFRVKATFADEKIRFSLQAVWCFRDLQLEIARRF 852
Query: 448 NLNDVTNILLKYLDDDGEWVVLACDGDLEECKDIHRSSQSRTIRLSLFQASPL-NLANTF 272
NLND+ N++LKYLDD+GEWVVLACD DLEECKD+H SS +RTIRLSLFQASPL NLAN+F
Sbjct: 853 NLNDMNNLVLKYLDDEGEWVVLACDSDLEECKDLHTSSHTRTIRLSLFQASPLNNLANSF 912
Query: 271 RNSSPS 254
RN+S S
Sbjct: 913 RNNSSS 918
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 553,003,972
Number of Sequences: 1393205
Number of extensions: 11633696
Number of successful extensions: 31585
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 30567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31542
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28855580904
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
