Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000633A_C01 KMC000633A_c01
(527 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T03792 kinesin-related protein tck1 - common tobacco gi|149... 209 2e-53
pir||T07397 kinesin heavy chain-like protein (clone PKCBP) - pot... 204 4e-52
gb|AAO72660.1| kinesin-like calmodulin-binding protein-like prot... 186 1e-46
ref|NP_569022.1| kinesin-like calmodulin-binding protein; protei... 185 3e-46
gb|AAC49901.1| kinesin-like calmodulin-binding protein [Arabidop... 185 3e-46
>pir||T03792 kinesin-related protein tck1 - common tobacco
gi|1491931|gb|AAC49393.1| kinesin-like protein
Length = 1265
Score = 209 bits (532), Expect = 2e-53
Identities = 102/119 (85%), Positives = 110/119 (91%)
Frame = -3
Query: 525 GDVISALSSGGQHIPYRNHKLTMLMSDSLGXNAKTLMFVNVSPIESSLDETHNSLMYASR 346
GDVISALSSG QHIPYRNHKLTMLMSDSLG NAKTLMFVN+SP ES+LDETHNSL YASR
Sbjct: 1147 GDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASR 1206
Query: 345 VRSIVNDPSKNVSSKEIMRLKKQVAYWKEQAGRRGEEEDLEEIQEVRPTKEKTDNRHSL 169
VRSIVNDPSKNVSSKE+ RLKK V YWKEQAGR+G++EDLEEIQ+ RPTKEKTD RHS+
Sbjct: 1207 VRSIVNDPSKNVSSKEVARLKKLVGYWKEQAGRKGDDEDLEEIQDERPTKEKTDGRHSM 1265
>pir||T07397 kinesin heavy chain-like protein (clone PKCBP) - potato
gi|1369852|gb|AAB37756.1| kinesin heavy chain-like
protein
Length = 1265
Score = 204 bits (520), Expect = 4e-52
Identities = 99/119 (83%), Positives = 111/119 (93%)
Frame = -3
Query: 525 GDVISALSSGGQHIPYRNHKLTMLMSDSLGXNAKTLMFVNVSPIESSLDETHNSLMYASR 346
GDVISALSSG QHIPYRNHKLTMLMSDSLG NAKTLMFVN+SP ES+LDETHNSL YASR
Sbjct: 1147 GDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASR 1206
Query: 345 VRSIVNDPSKNVSSKEIMRLKKQVAYWKEQAGRRGEEEDLEEIQEVRPTKEKTDNRHSL 169
VRSIVNDPSKNVSSKE+ RLKK V+YWKEQAGR+G++E+LEEIQ+ RPTK+KTD R+S+
Sbjct: 1207 VRSIVNDPSKNVSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDERPTKDKTDGRYSM 1265
>gb|AAO72660.1| kinesin-like calmodulin-binding protein-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 1226
Score = 186 bits (472), Expect = 1e-46
Identities = 93/115 (80%), Positives = 102/115 (87%)
Frame = -3
Query: 522 DVISALSSGGQHIPYRNHKLTMLMSDSLGXNAKTLMFVNVSPIESSLDETHNSLMYASRV 343
DVI ALSS GQHIPYRNHKLTMLMSDSLG NAKTLMFVNVSP ES+L+ET+NSLMYASRV
Sbjct: 1109 DVIGALSSDGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEETYNSLMYASRV 1168
Query: 342 RSIVNDPSKNVSSKEIMRLKKQVAYWKEQAGRRGEEEDLEEIQEVRPTKEKTDNR 178
R IVND SK+V+ KEIMRLKK +AYWKEQAG+R E++DLEEIQE R KEK DNR
Sbjct: 1169 RCIVNDTSKHVAPKEIMRLKKLIAYWKEQAGKRSEDDDLEEIQEERTPKEKADNR 1223
>ref|NP_569022.1| kinesin-like calmodulin-binding protein; protein id: At5g65930.1,
supported by cDNA: gi_1237101 [Arabidopsis thaliana]
gi|2224925|gb|AAB61712.1| kinesin-like protein
[Arabidopsis thaliana]
Length = 1259
Score = 185 bits (469), Expect = 3e-46
Identities = 90/115 (78%), Positives = 105/115 (91%)
Frame = -3
Query: 525 GDVISALSSGGQHIPYRNHKLTMLMSDSLGXNAKTLMFVNVSPIESSLDETHNSLMYASR 346
GDVI ALSSG QHIPYRNHKLTMLMSDSLG NAKTLMFVNVSP ES+LDET+NSL+YASR
Sbjct: 1145 GDVIGALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLLYASR 1204
Query: 345 VRSIVNDPSKNVSSKEIMRLKKQVAYWKEQAGRRGEEEDLEEIQEVRPTKEKTDN 181
VR+IVNDPSK++SSKE++RLKK VAYWKEQAG++GEEEDL +I+E R K++ D+
Sbjct: 1205 VRTIVNDPSKHISSKEMVRLKKLVAYWKEQAGKKGEEEDLVDIEEDRTRKDEADS 1259
>gb|AAC49901.1| kinesin-like calmodulin-binding protein [Arabidopsis thaliana]
Length = 1259
Score = 185 bits (469), Expect = 3e-46
Identities = 90/115 (78%), Positives = 105/115 (91%)
Frame = -3
Query: 525 GDVISALSSGGQHIPYRNHKLTMLMSDSLGXNAKTLMFVNVSPIESSLDETHNSLMYASR 346
GDVI ALSSG QHIPYRNHKLTMLMSDSLG NAKTLMFVNVSP ES+LDET+NSL+YASR
Sbjct: 1145 GDVIGALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLLYASR 1204
Query: 345 VRSIVNDPSKNVSSKEIMRLKKQVAYWKEQAGRRGEEEDLEEIQEVRPTKEKTDN 181
VR+IVNDPSK++SSKE++RLKK VAYWKEQAG++GEEEDL +I+E R K++ D+
Sbjct: 1205 VRTIVNDPSKHISSKEMVRLKKLVAYWKEQAGKKGEEEDLVDIEEDRTRKDEADS 1259
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 396,565,492
Number of Sequences: 1393205
Number of extensions: 7554996
Number of successful extensions: 21550
Number of sequences better than 10.0: 708
Number of HSP's better than 10.0 without gapping: 20623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21448
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
