Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000621A_C02 KMC000621A_c02
(588 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG49357.1| GLCD beta [Aspergillus nidulans] 36 0.41
gb|AAG49356.1|AF320978_3 GLCD gamma [Aspergillus nidulans] 36 0.41
ref|NP_702849.1| hypothetical protein [Plasmodium falciparum 3D7... 33 3.5
emb|CAC40694.1| bA360I23.1.2 (dachshund (Drosophila) homolog (is... 32 4.5
gb|AAG26008.1|AF312017_1 beta-glucosidase precursor [Tenebrio mo... 32 7.8
>gb|AAG49357.1| GLCD beta [Aspergillus nidulans]
Length = 277
Score = 35.8 bits (81), Expect = 0.41
Identities = 26/115 (22%), Positives = 52/115 (44%), Gaps = 4/115 (3%)
Frame = -2
Query: 515 FGWGDDEEVPSGYDSGPNEHGADNLNGQLIYHESNLHISDTYQNKKTLPVALVH----GE 348
FG+G + + S ++ G + D L I+ ++ + + + + +A+ H +
Sbjct: 34 FGFGSQQNMSSSFNFGNSGIDTDELLDLEIHGQNGVQQNYLQDHPSSAGIAMSHPSHMSQ 93
Query: 347 ILPHTPPHCVLRDEYMQKKIFFVI*PGVREGQANAS*RVDGFNLFKQTTYNTKAR 183
I +TP + +MQ + GV +GQ N+S + +Q+ N+KAR
Sbjct: 94 IYSNTPEGGPMHSPFMQSSFNYDHFRGVNQGQLNSSHIQSAGSHLEQSYLNSKAR 148
>gb|AAG49356.1|AF320978_3 GLCD gamma [Aspergillus nidulans]
Length = 299
Score = 35.8 bits (81), Expect = 0.41
Identities = 26/115 (22%), Positives = 52/115 (44%), Gaps = 4/115 (3%)
Frame = -2
Query: 515 FGWGDDEEVPSGYDSGPNEHGADNLNGQLIYHESNLHISDTYQNKKTLPVALVH----GE 348
FG+G + + S ++ G + D L I+ ++ + + + + +A+ H +
Sbjct: 56 FGFGSQQNMSSSFNFGNSGIDTDELLDLEIHGQNGVQQNYLQDHPSSAGIAMSHPSHMSQ 115
Query: 347 ILPHTPPHCVLRDEYMQKKIFFVI*PGVREGQANAS*RVDGFNLFKQTTYNTKAR 183
I +TP + +MQ + GV +GQ N+S + +Q+ N+KAR
Sbjct: 116 IYSNTPEGGPMHSPFMQSSFNYDHFRGVNQGQLNSSHIQSAGSHLEQSYLNSKAR 170
>ref|NP_702849.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23498265|emb|CAD49237.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 3370
Score = 32.7 bits (73), Expect = 3.5
Identities = 20/77 (25%), Positives = 35/77 (44%), Gaps = 8/77 (10%)
Frame = -2
Query: 584 RLFEVQDRDFMNVR--------YRTPPFRYEFGWGDDEEVPSGYDSGPNEHGADNLNGQL 429
++F + D F N+ Y F Y +G+G D+E P ++ NE NL
Sbjct: 1586 KMFILNDEMFNNINNNNNINNYYDYNNFHYNYGYGGDDEYPINFNHDKNE--VVNLKYDN 1643
Query: 428 IYHESNLHISDTYQNKK 378
++SN++ + NK+
Sbjct: 1644 YLNKSNIYEGNNISNKE 1660
>emb|CAC40694.1| bA360I23.1.2 (dachshund (Drosophila) homolog (isoform 2)) [Homo
sapiens]
Length = 424
Score = 32.3 bits (72), Expect = 4.5
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2
Query: 494 EVPSGYDSGPNEHGADNLNGQLIYHESNLHISDTYQNKKTLPVALVHGEILPHTPP 327
E S Y + N+HGAD+ NG + S++ SD +K+TLP + G T P
Sbjct: 28 EAMSNYHASNNQHGADSENGDM---NSSVGSSDGSWDKETLPSSPSQGPQASITHP 80
>gb|AAG26008.1|AF312017_1 beta-glucosidase precursor [Tenebrio molitor]
Length = 502
Score = 31.6 bits (70), Expect = 7.8
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 536 TPPFRYEFGWGDDEEVPSGYDSGPNEHG---ADNLNGQLIYHESNLHISDTYQNKKTLPV 366
T ++ E GW +D + S +D G +EH ADN NG + + + D Q KTL V
Sbjct: 34 TAAYQVEGGWDEDGKGESIWDRGTHEHADWVADNSNGDIACDSYHKYKEDV-QMLKTLGV 92
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,843,529
Number of Sequences: 1393205
Number of extensions: 11504263
Number of successful extensions: 30160
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30157
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
