Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000597A_C01 KMC000597A_c01
(526 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC18199.1| putative protein [Neurospora crassa] 36 0.24
ref|XP_111151.2| similar to Putative serine/threonine-protein ki... 35 0.54
ref|NP_704503.1| methionine aminopeptidase, putative [Plasmodium... 34 1.2
gb|EAA15150.1| agCP4972 [Anopheles gambiae str. PEST] 34 1.2
ref|NP_524213.1| Cysteine string protein CG6395-PA gi|157127|gb|... 33 1.6
>emb|CAC18199.1| putative protein [Neurospora crassa]
Length = 147
Score = 36.2 bits (82), Expect = 0.24
Identities = 9/11 (81%), Positives = 11/11 (99%)
Frame = -1
Query: 145 CCCCCCCCIIV 113
CCCCCCCC++V
Sbjct: 22 CCCCCCCCVVV 32
Score = 34.7 bits (78), Expect = 0.70
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 145 CCCCCCCCIIV 113
CCCCCCCC +V
Sbjct: 21 CCCCCCCCCVV 31
Score = 31.2 bits (69), Expect = 7.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 145 CCCCCCCCIIV 113
CCCCCCC +++
Sbjct: 23 CCCCCCCVVVL 33
>ref|XP_111151.2| similar to Putative serine/threonine-protein kinase P78 [Mus
musculus]
Length = 526
Score = 35.0 bits (79), Expect = 0.54
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1
Query: 145 CCCCCCCCIIV 113
CCCCCCCCI V
Sbjct: 334 CCCCCCCCICV 344
Score = 33.5 bits (75), Expect = 1.6
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 145 CCCCCCCCII 116
CCCCCCCC I
Sbjct: 333 CCCCCCCCCI 342
Score = 33.1 bits (74), Expect = 2.0
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = -1
Query: 148 FCCCCCCCCIIV 113
+CCCCCCCC +
Sbjct: 331 WCCCCCCCCCCI 342
>ref|NP_704503.1| methionine aminopeptidase, putative [Plasmodium falciparum 3D7]
gi|23499242|emb|CAD51322.1| methionine aminopeptidase,
putative [Plasmodium falciparum 3D7]
Length = 740
Score = 33.9 bits (76), Expect = 1.2
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 145 CCCCCCCCI 119
CCCCCCCCI
Sbjct: 73 CCCCCCCCI 81
Score = 33.5 bits (75), Expect = 1.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 142 CCCCCCCIIVNQEF 101
CCCCCCC I N ++
Sbjct: 73 CCCCCCCCIYNDKY 86
>gb|EAA15150.1| agCP4972 [Anopheles gambiae str. PEST]
Length = 1120
Score = 33.9 bits (76), Expect = 1.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 145 CCCCCCCCIIVNQEFF 98
CCCCCCCC +E F
Sbjct: 15 CCCCCCCCWCSEEENF 30
>ref|NP_524213.1| Cysteine string protein CG6395-PA gi|157127|gb|AAA28431.1| csp29
gi|3047005|gb|AAD09431.1| cysteine string protein 3
[Drosophila melanogaster] gi|7296533|gb|AAF51817.1|
CG6395-PA [Drosophila melanogaster]
Length = 223
Score = 33.5 bits (75), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 145 CCCCCCCCIIVN 110
CCCCCCCC N
Sbjct: 121 CCCCCCCCCCCN 132
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 440,950,878
Number of Sequences: 1393205
Number of extensions: 9356112
Number of successful extensions: 100472
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86135
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
