Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000582A_C02 KMC000582A_c02
(575 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD35089.1|AF148877_1 putative aldehyde dehydrogenase OS-ALDH... 93 2e-18
ref|NP_195348.1| aldehyde dehydrogenase like protein; protein id... 84 2e-15
gb|AAM61211.1| aldehyde dehydrogenase, putative [Arabidopsis tha... 81 8e-15
ref|NP_175081.1| aldehyde dehydrogenase, putative; protein id: A... 81 8e-15
gb|AAF31413.1|AF201890_1 aldehyde dehydrogenase [Gossypium herba... 80 2e-14
>gb|AAD35089.1|AF148877_1 putative aldehyde dehydrogenase OS-ALDH [Oryza sativa subsp.
indica]
Length = 486
Score = 93.2 bits (230), Expect = 2e-18
Identities = 41/76 (53%), Positives = 55/76 (71%)
Frame = -2
Query: 574 FGGVGESGFGKYHGKFSFDAFSHQKAILRRSYLSDFWYRYPPWTLNKFQLLEVSYNYDYV 395
FGG+GESGFG+YHGK++F+ FSH+KA++RRS L +F +RYPPW K +L + +DYV
Sbjct: 411 FGGIGESGFGQYHGKYTFELFSHRKAVVRRSLLVEFMFRYPPWDEYKMGMLRRVFRFDYV 470
Query: 394 GLLLVLLGIKRLSNRR 347
L+L LL L RR
Sbjct: 471 SLVLALLAFWLLGIRR 486
>ref|NP_195348.1| aldehyde dehydrogenase like protein; protein id: At4g36250.1
[Arabidopsis thaliana] gi|7431493|pir||T04594 aldehyde
dehydrogenase homolog F23E13.140 - Arabidopsis thaliana
gi|2961384|emb|CAA18131.1| aldehyde dehydrogenase like
protein [Arabidopsis thaliana]
gi|7270578|emb|CAB80296.1| aldehyde dehydrogenase like
protein [Arabidopsis thaliana]
Length = 433
Score = 83.6 bits (205), Expect = 2e-15
Identities = 37/71 (52%), Positives = 49/71 (68%)
Frame = -2
Query: 574 FGGVGESGFGKYHGKFSFDAFSHQKAILRRSYLSDFWYRYPPWTLNKFQLLEVSYNYDYV 395
FGGVGESG G+YHGK+SFD FSH+KAI+ S D RYPPW K + +++ Y
Sbjct: 363 FGGVGESGIGRYHGKYSFDCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYF 422
Query: 394 GLLLVLLGIKR 362
L+L++LG+KR
Sbjct: 423 KLILLMLGLKR 433
>gb|AAM61211.1| aldehyde dehydrogenase, putative [Arabidopsis thaliana]
Length = 484
Score = 81.3 bits (199), Expect = 8e-15
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -2
Query: 574 FGGVGESGFGKYHGKFSFDAFSHQKAILRRSYLSDFWYRYPPWTLNKFQLLEVSYNYDYV 395
FGGVGESG G YHGKFSFDAFSH+KA+L RS D RYPP++ K +LL+ + +
Sbjct: 415 FGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIF 474
Query: 394 GLLLVLLGI 368
L VLLG+
Sbjct: 475 DLFKVLLGL 483
>ref|NP_175081.1| aldehyde dehydrogenase, putative; protein id: At1g44170.1,
supported by cDNA: 1141., supported by cDNA: gi_18175878
[Arabidopsis thaliana] gi|25284174|pir||H96505 probable
aldehyde dehydrogenase [imported] - Arabidopsis thaliana
gi|12320819|gb|AAG50550.1|AC074228_5 aldehyde
dehydrogenase, putative [Arabidopsis thaliana]
gi|18175879|gb|AAL59944.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
Length = 484
Score = 81.3 bits (199), Expect = 8e-15
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -2
Query: 574 FGGVGESGFGKYHGKFSFDAFSHQKAILRRSYLSDFWYRYPPWTLNKFQLLEVSYNYDYV 395
FGGVGESG G YHGKFSFDAFSH+KA+L RS D RYPP++ K +LL+ + +
Sbjct: 415 FGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIF 474
Query: 394 GLLLVLLGI 368
L VLLG+
Sbjct: 475 DLFKVLLGL 483
>gb|AAF31413.1|AF201890_1 aldehyde dehydrogenase [Gossypium herbaceum]
Length = 76
Score = 79.7 bits (195), Expect = 2e-14
Identities = 36/68 (52%), Positives = 47/68 (68%)
Frame = -2
Query: 574 FGGVGESGFGKYHGKFSFDAFSHQKAILRRSYLSDFWYRYPPWTLNKFQLLEVSYNYDYV 395
FGGVG+SG G YHGKFSFD FSH+KA+L RS+ D RYPP+T K +LL+ +
Sbjct: 5 FGGVGDSGMGAYHGKFSFDTFSHKKAVLYRSFAGDAPLRYPPYTNGKLRLLKALLGGSIL 64
Query: 394 GLLLVLLG 371
G++ L+G
Sbjct: 65 GIIRALMG 72
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 490,303,759
Number of Sequences: 1393205
Number of extensions: 10233754
Number of successful extensions: 25718
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 24993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25709
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
